RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 WASF1Q92558 559 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 RUBCNQ92622 972 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 PRIMPOLQ96LW4 560 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 BCO2Q9BYV7 579 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 MRPS23Q9Y3D9 190 aaKnown RBP12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 NCANO14594 1321 aa12.35□□□□□ -0.43
PRKCSH-220ENST00000593104 OTOGLQ3ZCN5 2332 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ARHGEF35A5YM69 484 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ACKR2O00590 384 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 LAMTOR5O43504 91 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 KINO60870 393 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 XYLBO75191 536 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 SEC24AO95486 1093 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 CYP11B2P19099 503 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 HOXA9P31269 272 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 HOXC13P31276 330 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 CCR2P41597 374 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 FZD5Q13467 585 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ZC3H14Q6PJT7 736 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 GPIHBP1Q8IV16 184 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 MCPH1Q8NEM0 835 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 SEMA4AQ9H3S1 761 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 TUFT1Q9NNX1 390 aa12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 NDRG2Q9UN36 371 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-220ENST00000593104 TICRRQ7Z2Z1 1910 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 DMXL1Q9Y485 3027 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 C1RP00736 705 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 HARSP12081 509 aaKnown RBP12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 FCARP24071 287 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 NAMPTP43490 491 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 ROR1Q01973 937 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 UPP1Q16831 310 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 SHDQ96IW2 340 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 NACC1Q96RE7 527 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 CORO1BQ9BR76 489 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 C2orf40Q9H1Z8 148 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 BHMT2Q9H2M3 363 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 ZFP37Q9Y6Q3 630 aaPredicted RBP12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 COL4A2P08572 1712 aa12.33□□□□□ -0.44
PRKCSH-220ENST00000593104 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 OR52Z1P0C646 297 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 CDR1P51861 262 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 PRKCQQ04759 706 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 ELAVL2Q12926 359 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 MTAPQ13126 283 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 PUM1Q14671 1186 aaKnown RBP eCLIP12.32□□□□□ -0.442e-6■□□□□ 8.9
PRKCSH-220ENST00000593104 FAM78AQ5JUQ0 283 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 VARS2Q5ST30 1063 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 TAS1R3Q7RTX0 852 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 POLR3CQ9BUI4 534 aaPredicted RBP12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 TARS2Q9BW92 718 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 CDT1Q9H211 546 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
PRKCSH-220ENST00000593104 CCDC169A6NNP5 214 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 E9PMD0 336 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 TMEM189-UBE2V1I3L0A0 370 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 PODXLO00592 558 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 PRRG1O14668 218 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 RPA1P27694 616 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 VIPR2P41587 438 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 SPAG1Q07617 926 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 TRIM29Q14134 588 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 DCAF4L1Q3SXM0 396 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 PRSS36Q5K4E3 855 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 ZBTB41Q5SVQ8 909 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 ZBTB45Q96K62 511 aaPredicted RBP12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 KCNH3Q9ULD8 1083 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 SMG5Q9UPR3 1016 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 BACE2Q9Y5Z0 518 aa12.31□□□□□ -0.44
PRKCSH-220ENST00000593104 CITO14578 2027 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 DCDC2BA2VCK2 349 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 SFI1A8K8P3 1242 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 MOSPD3O75425 235 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 ECI2O75521 394 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 KRT37O76014 449 aa12.3□□□□□ -0.44
PRKCSH-220ENST00000593104 LRG1P02750 347 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms