RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
TRIM47-206ENST00000592942 GOLGA6L4A6NEF3 574 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 C2orf71A6NGG8 1288 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 LINC01565O15544 149 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 NR1I2O75469 434 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 RPN1P04843 607 aaKnown RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 GARTP22102 1010 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 CLCNKBP51801 687 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 WNT7BP56706 349 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 POU5F1Q01860 360 aaKnown RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 DLX2Q07687 328 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 PSMD2Q13200 908 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 ADAM15Q13444 863 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 RBM23Q86U06 439 aaKnown RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 C3orf58Q8NDZ4 430 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 POMGNT1Q8WZA1 660 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
TRIM47-206ENST00000592942 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
TRIM47-206ENST00000592942 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 KIF4AO95239 1232 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 SOD2P04179 222 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 NRIP1P48552 1158 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 TFF2Q03403 129 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 SKIV2LQ15477 1246 aaKnown RBP16.67■□□□□ 0.26
TRIM47-206ENST00000592942 DUSP6Q16828 381 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 FUT10Q6P4F1 479 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 DCLRE1AQ6PJP8 1040 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 CLEC17AQ6ZS10 378 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 VN1R2Q8NFZ6 395 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 HLA-CQ95604 372 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 PABPC5Q96DU9 382 aaKnown RBP16.67■□□□□ 0.26
TRIM47-206ENST00000592942 TIGD1Q96MW7 591 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 PCIF1Q9H4Z3 704 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 TLE6Q9H808 572 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 ENTPD7Q9NQZ7 604 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 BRWD1Q9NSI6 2320 aa16.67■□□□□ 0.26
TRIM47-206ENST00000592942 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 TADA2AO75478 443 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 GLP2RO95838 553 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
TRIM47-206ENST00000592942 PNOCQ13519 176 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
TRIM47-206ENST00000592942 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 NELFCDQ8IXH7 590 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 EFHBQ8N7U6 833 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 SPATA20Q8TB22 786 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 HASPINQ8TF76 798 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 SAAL1Q96ER3 474 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 B3GALT6Q96L58 329 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 HERC2P3Q9BVR0 1158 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
TRIM47-206ENST00000592942 SLC38A7Q9NVC3 462 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 TUBGCP4Q9UGJ1 667 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 COG5Q9UP83 839 aa16.66■□□□□ 0.26
TRIM47-206ENST00000592942 MUC3AQ02505 3323 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 GOLGA8IPA6NC78 632 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 GOLGA8JA6NMD2 632 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 NCK2O43639 380 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 DSG1Q02413 1049 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 KCNB1Q14721 858 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 KNOP1Q1ED39 458 aaKnown RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 JADE1Q6IE81 842 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 CD302Q8IX05 232 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 ELOA2Q8IYF1 753 aaPredicted RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 DDX27Q96GQ7 796 aaKnown RBP16.65■□□□□ 0.26
TRIM47-206ENST00000592942 FBXL18Q96ME1 805 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 UROC1Q96N76 676 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 KCTD10Q9H3F6 313 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 ASB7Q9H672 318 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 AGPAT3Q9NRZ7 376 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 EXOC1Q9NV70 894 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 CLEC1BQ9P126 229 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 THEGQ9P2T0 379 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 STK39Q9UEW8 545 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 UBE4BO95155 1302 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 ANK1P16157 1881 aa16.65■□□□□ 0.26
TRIM47-206ENST00000592942 PODXLO00592 558 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 CLIC2O15247 247 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 EXTL3O43909 919 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 TBX10O75333 385 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 B3GAT3O94766 335 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 LDHAP00338 332 aaKnown RBP16.64■□□□□ 0.25
TRIM47-206ENST00000592942 NFICP08651 508 aa16.64■□□□□ 0.25
TRIM47-206ENST00000592942 CNPP09543 421 aaKnown RBP16.64■□□□□ 0.25
TRIM47-206ENST00000592942 CYP3A5P20815 502 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms