RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 MRPL11Q9Y3B7 192 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 SLX4Q8IY92 1834 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 STX2P32856 288 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 MSH2P43246 934 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 KRT39Q6A163 491 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 GDAP1Q8TB36 358 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 KIFAP3Q92845 792 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 THOC1Q96FV9 657 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 NAALADL1Q9UQQ1 740 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 FOXO6A8MYZ6 492 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 ATF2P15336 505 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 SLC1A1P43005 524 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 RARRES1P49788 294 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 RBM5P52756 815 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 MGAT5Q09328 741 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 CLEC16AQ2KHT3 1053 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 MIER3Q7Z3K6 550 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 ATG4AQ8WYN0 398 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 RMDN2Q96LZ7 410 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 IWS1Q96ST2 819 aa15.84■□□□□ 0.13
SMARCA4-219ENST00000592604 CETPP11597 493 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 MAPK4P31152 587 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 CENPCQ03188 943 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 STRN3Q13033 797 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 STAT4Q14765 748 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 LLGL1Q15334 1064 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 ZKSCAN8Q15776 578 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 CCDC174Q6PII3 467 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 PPP1R21Q6ZMI0 780 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 KIF2BQ8N4N8 673 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 BBOF1Q8ND07 529 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 FAM81BQ96LP2 452 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 HERPUD2Q9BSE4 406 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 TRIM7Q9C029 511 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 AVENQ9NQS1 362 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 NKIRAS1Q9NYS0 192 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 ANAPC7Q9UJX3 599 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 ZHX2Q9Y6X8 837 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 PPP1R12AO14974 1030 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 ENTPD3O75355 529 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 TAC1P20366 129 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 PARD3BQ8TEW8 1205 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 PRCCQ92733 491 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 TMEM8AQ9HCN3 771 aa15.83■□□□□ 0.12
SMARCA4-219ENST00000592604 LYPLA2O95372 231 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 ADCY8P40145 1251 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 ECE1P42892 770 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 CCNG1P51959 295 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 PTP4A2Q12974 167 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 NAA25Q14CX7 972 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 DACT2Q5SW24 774 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 DDX27Q96GQ7 796 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 NT5C1BQ96P26 610 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 CCDC77Q9BR77 488 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 DBNDD1Q9H9R9 158 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■■■ 151.6
SMARCA4-219ENST00000592604 WFS1O76024 890 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 UNC5CO95185 931 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 UNGP13051 313 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 NPR1P16066 1061 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 ITGB5P18084 799 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 NCKAP1LP55160 1127 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 SNRNP35Q16560 246 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 TMEM63BQ5T3F8 832 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 ECHDC2Q86YB7 292 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 CBWD2Q8IUF1 395 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 TIPINQ9BVW5 301 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 DNAJC17Q9NVM6 304 aaKnown RBP15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 SERPINA10Q9UK55 444 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 TMX2Q9Y320 296 aa15.82■□□□□ 0.12
SMARCA4-219ENST00000592604 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 MAGEB2O15479 319 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 DHX15O43143 795 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 TRIP13Q15645 432 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 RIBC1Q8N443 379 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 CHURC1Q8WUH1 139 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 CNKSR1Q969H4 720 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 FAXDC2Q96IV6 333 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ARHGEF10LQ9HCE6 1279 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ADAM22Q9P0K1 906 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 A8MUI8 341 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 DIAPH2O60879 1101 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ABHD2P08910 425 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 ADSSP30520 456 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 FOXN2P32314 431 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 LACTBP83111 547 aaPredicted RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 CCNG2Q16589 344 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 SRRM1Q8IYB3 904 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 MCOLN2Q8IZK6 566 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 SLC17A8Q8NDX2 589 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 FBXL13Q8NEE6 735 aa15.81■□□□□ 0.12
SMARCA4-219ENST00000592604 MAML1Q92585 1016 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms