RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 KCTD2Q14681 263 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 CLUL1Q15846 466 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 SEZ6Q53EL9 994 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 GPAT2Q6NUI2 795 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 USP50Q70EL3 339 aaPredicted RBP21.13■□□□□ 0.97
MBD3-209ENST00000592012 FASTKD5Q7L8L6 764 aaKnown RBP21.13■□□□□ 0.97
MBD3-209ENST00000592012 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
MBD3-209ENST00000592012 MMP19Q99542 508 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 CGRRF1Q99675 332 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 WNT8AQ9H1J5 351 aa21.13■□□□□ 0.97
MBD3-209ENST00000592012 OPA1O60313 960 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 YBX3P16989 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
MBD3-209ENST00000592012 ACO1P21399 889 aaKnown RBP21.12■□□□□ 0.97
MBD3-209ENST00000592012 EFNA5P52803 228 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 HLTFQ14527 1009 aaKnown RBP eCLIP21.12■□□□□ 0.97
MBD3-209ENST00000592012 KCTD19Q17RG1 926 aaPredicted RBP21.12■□□□□ 0.97
MBD3-209ENST00000592012 CCDC62Q6P9F0 684 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 PLPPR4Q7Z2D5 763 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 ADAT2Q7Z6V5 191 aaKnown RBP21.12■□□□□ 0.97
MBD3-209ENST00000592012 ZNF677Q86XU0 584 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 OR5B17Q8NGF7 314 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 PIK3R5Q8WYR1 880 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 ERVK-5Q9HDB9 667 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 IGKV6-21A0A0C4DH24 114 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 NOP56O00567 594 aaKnown RBP21.12■□□□□ 0.97
MBD3-209ENST00000592012 OSBPP22059 807 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 BPIFB4P59827 614 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 LAMTOR4Q0VGL1 99 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 PPP2R5EQ16537 467 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 ATP8B4Q8TF62 1192 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 CCDC113Q9H0I3 377 aa21.12■□□□□ 0.97
MBD3-209ENST00000592012 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
MBD3-209ENST00000592012 FAM189A1O60320 539 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 HSPA9P38646 679 aaKnown RBP21.11■□□□□ 0.97
MBD3-209ENST00000592012 CUL2Q13617 745 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 CDCA2Q69YH5 1023 aaPredicted RBP21.11■□□□□ 0.97
MBD3-209ENST00000592012 CPNE8Q86YQ8 564 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 FBXO16Q8IX29 292 aaPredicted RBP21.11■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA6L1Q8N7Z2 621 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 NEUROG2Q9H2A3 272 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA6L10A0A0M3HER8 536 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 DAPK3O43293 454 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 SRGAP2CP0DJJ0 459 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 MXD4Q14582 209 aaPredicted RBP21.11■□□□□ 0.97
MBD3-209ENST00000592012 CFAP58Q5T655 872 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 L3MBTL3Q96JM7 780 aaPredicted RBP21.11■□□□□ 0.97
MBD3-209ENST00000592012 RUFY1Q96T51 708 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 MROH8Q9H579 483 aa21.11■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA6CA6NDK9 693 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA8KD6RF30 607 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 GAS2O43903 313 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 TOM1L1O75674 476 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA6DP0CG33 693 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 HARSP12081 509 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 EPHX2P34913 555 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 CTNNA1P35221 906 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 PLCB4Q15147 1175 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 MCOLN2Q8IZK6 566 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 LRRC71Q8N4P6 559 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 TCP11Q8WWU5 503 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 SPATA33Q96N06 139 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 MRPL4Q9BYD3 311 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 GOLGA6AQ9NYA3 693 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 UTP11Q9Y3A2 253 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 PCDHA3Q9Y5H8 950 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 PYGMP11217 842 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 CAPN2P17655 700 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 PPFIA1Q13136 1202 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 TMEM63BQ5T3F8 832 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 SCARA3Q6AZY7 606 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 DPY19L2Q6NUT2 758 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 RNF149Q8NC42 400 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 CPA5Q8WXQ8 436 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 ACO2Q99798 780 aaKnown RBP21.1■□□□□ 0.97
MBD3-209ENST00000592012 SYT17Q9BSW7 474 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 NUB1Q9Y5A7 615 aa21.1■□□□□ 0.97
MBD3-209ENST00000592012 CCDC66A2RUB6 948 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 SPOPO43791 374 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 CYP1A1P04798 512 aaPredicted RBP21.09■□□□□ 0.97
MBD3-209ENST00000592012 TNFSF9P41273 254 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 WDR78Q5VTH9 848 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 BRSK2Q8IWQ3 736 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 EXOC8Q8IYI6 725 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 ZDHHC14Q8IZN3 488 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 COPS5Q92905 334 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 ARL8AQ96BM9 186 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 TCHPQ9BT92 498 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 KRT14P02533 472 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 CLTAP09496 248 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 CTNNA2P26232 953 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 GJA5P36382 358 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 NOP14P78316 857 aaKnown RBP21.09■□□□□ 0.97
MBD3-209ENST00000592012 NCOA4Q13772 614 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 ZBTB33Q86T24 672 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 FAM76AQ8TAV0 307 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 AVENQ9NQS1 362 aaPredicted RBP21.09■□□□□ 0.97
MBD3-209ENST00000592012 CNTN6Q9UQ52 1028 aa21.09■□□□□ 0.97
MBD3-209ENST00000592012 HSPA6P17066 643 aa21.08■□□□□ 0.97
MBD3-209ENST00000592012 DR1Q01658 176 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms