RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ZMYND10O75800 440 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
VPS4B-207ENST00000591519 PRKCBP05771 671 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 SPATA31D3P0C874 917 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 LAMP2P13473 410 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 AOC1P19801 751 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
VPS4B-207ENST00000591519 ELAVL2Q12926 359 aaKnown RBP11.46□□□□□ -0.57
VPS4B-207ENST00000591519 RTP2Q5QGT7 225 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 SPATA31D4Q6ZUB0 917 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 IGSF22Q8N9C0 903 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 RABGGTAQ92696 567 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 MYADMQ96S97 322 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 CLSTN3Q9BQT9 956 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 ADPGKQ9BRR6 497 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 TTPALQ9BTX7 342 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 CXCL16Q9H2A7 254 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
VPS4B-207ENST00000591519 LRWD1Q9UFC0 647 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
VPS4B-207ENST00000591519 DOCK8Q8NF50 2099 aa11.46□□□□□ -0.57
VPS4B-207ENST00000591519 ANHXE9PGG2 379 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 TMEM189-UBE2V1I3L0A0 370 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 K7ERI5 159 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 PI15O43692 258 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 RECQL4O94761 1208 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 KIF4AO95239 1232 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 EDN1P05305 212 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 HNRNPA1P09651 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 RPL17P18621 184 aaKnown RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 HOXA9P31269 272 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 CCT6AP40227 531 aaKnown RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 NBL1P41271 181 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 DCAF4L1Q3SXM0 396 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 XKR4Q5GH76 650 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 NT5DC1Q5TFE4 455 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 FAM171A1Q5VUB5 890 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 EEF1DP3Q658K8 133 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 CWF19L1Q69YN2 538 aaKnown RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 PDXDC1Q6P996 788 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 RTL10Q7L3V2 364 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 IFT74Q96LB3 600 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 NTPCRQ9BSD7 190 aaKnown RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 BHMT2Q9H2M3 363 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 MFSD1Q9H3U5 465 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 PIDD1Q9HB75 910 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 PTPRHQ9HD43 1115 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 FAM86C1Q9NVL1 165 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 CACNG4Q9UBN1 327 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 FBXW11Q9UKB1 542 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 NOL7Q9UMY1 257 aaKnown RBP11.45□□□□□ -0.58
VPS4B-207ENST00000591519 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 USP20Q9Y2K6 914 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 USP34Q70CQ2 3546 aa11.45□□□□□ -0.58
VPS4B-207ENST00000591519 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 LAD1O00515 517 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 POU2F2P09086 479 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 MYBP10242 640 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 SRFP11831 508 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 FGFR3P22607 806 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 GBP2P32456 591 aaPredicted RBP11.44□□□□□ -0.58
VPS4B-207ENST00000591519 PRPHP41219 470 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 PTGDRQ13258 359 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 RAB33AQ14088 237 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 UVSSAQ2YD98 709 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 DCLRE1AQ6PJP8 1040 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 ALKAL1Q6UXT8 129 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
VPS4B-207ENST00000591519 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
VPS4B-207ENST00000591519 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 RSAD2Q8WXG1 361 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
VPS4B-207ENST00000591519 RTP3Q9BQQ7 232 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 RAB34Q9BZG1 259 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 TNFSF13BQ9Y275 285 aa11.44□□□□□ -0.58
VPS4B-207ENST00000591519 ZFHX2Q9C0A1 2572 aaPredicted RBP11.44□□□□□ -0.58
VPS4B-207ENST00000591519 KRBA1A5PL33 1030 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 NARSO43776 548 aaKnown RBP11.43□□□□□ -0.58
VPS4B-207ENST00000591519 B3GAT3O94766 335 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
VPS4B-207ENST00000591519 PSMD5Q16401 504 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 UPP1Q16831 310 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 TMEM132AQ24JP5 1023 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 C1orf186Q6ZWK4 172 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 CEP57Q86XR8 500 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 GLYCTKQ8IVS8 523 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 CCDC105Q8IYK2 499 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 DAW1Q8N136 415 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 SIX5Q8N196 739 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 KCTD17Q8N5Z5 321 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 FLCNQ8NFG4 579 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 KCNV2Q8TDN2 545 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 HASPINQ8TF76 798 aa11.43□□□□□ -0.58
VPS4B-207ENST00000591519 UROC1Q96N76 676 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms