RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
VMP1-211ENST00000591315 MRPL43Q8N983 215 aaKnown RBP12.57□□□□□ -0.4
VMP1-211ENST00000591315 RSPH1Q8WYR4 309 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 COLEC11Q9BWP8 271 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 MAGEF1Q9HAY2 307 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 TUBGCP4Q9UGJ1 667 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
VMP1-211ENST00000591315 STYXL1Q9Y6J8 313 aa12.57□□□□□ -0.4
VMP1-211ENST00000591315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 TTC26A0AVF1 554 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 LILRB3O75022 631 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 ZNF202O95125 648 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 CLTAP09496 248 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 STK4Q13043 487 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 ADAM15Q13444 863 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 PTPN14Q15678 1187 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 SCARA3Q6AZY7 606 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 KRBA2Q6ZNG9 492 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 RNF168Q8IYW5 571 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 SYCP3Q8IZU3 236 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 SCFD1Q8WVM8 642 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 POMGNT1Q8WZA1 660 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 HERC2P3Q9BVR0 1158 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 NGRNQ9NPE2 291 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 CHMP5Q9NZZ3 219 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 CLEC1BQ9P126 229 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 CNTN3Q9P232 1028 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 CPSF3Q9UKF6 684 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 ADAM28Q9UKQ2 775 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 AGO2Q9UKV8 859 aaKnown RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 BARX2Q9UMQ3 279 aaPredicted RBP12.56□□□□□ -0.4
VMP1-211ENST00000591315 PCDHB13Q9Y5F0 798 aa12.56□□□□□ -0.4
VMP1-211ENST00000591315 TULP1O00294 542 aaPredicted RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 PPEF2O14830 753 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 TADA2AO75478 443 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 SOD2P04179 222 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 NFICP08651 508 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 SCP2P22307 547 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 BRCC3P46736 316 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 ZBTB6Q15916 424 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 UPP1Q16831 310 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 FUT10Q6P4F1 479 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 EFHBQ8N7U6 833 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 KIAA0895Q8NCT3 520 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 ENGASEQ8NFI3 743 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 ZNF507Q8TCN5 953 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 NOC3LQ8WTT2 800 aaKnown RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 ASB2Q96Q27 587 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 APOL5Q9BWW9 433 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 RPF1Q9H9Y2 349 aaKnown RBP12.55□□□□□ -0.4
VMP1-211ENST00000591315 CDH22Q9UJ99 828 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 SCN1AP35498 2009 aa12.55□□□□□ -0.4
VMP1-211ENST00000591315 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 CLIC2O15247 247 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 TGFB1I1O43294 461 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 NR1I2O75469 434 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 CNPP09543 421 aaKnown RBP12.54□□□□□ -0.4
VMP1-211ENST00000591315 BMP1P13497 986 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 EPCAMP16422 314 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 MRPS5P82675 430 aaKnown RBP12.54□□□□□ -0.4
VMP1-211ENST00000591315 DPYDQ12882 1025 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 PNOCQ13519 176 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 KCNC3Q14003 757 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 RTP2Q5QGT7 225 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 FAM171A1Q5VUB5 890 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 JADE1Q6IE81 842 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 SLFN12LQ6IEE8 588 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 PDE12Q6L8Q7 609 aaKnown RBP12.54□□□□□ -0.4
VMP1-211ENST00000591315 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 KLHL5Q96PQ7 755 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 PYM1Q9BRP8 204 aaKnown RBP12.54□□□□□ -0.4
VMP1-211ENST00000591315 CHST7Q9NS84 486 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 USP25Q9UHP3 1055 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 COG5Q9UP83 839 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 DOCK6Q96HP0 2047 aa12.54□□□□□ -0.4
VMP1-211ENST00000591315 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms