RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 C2orf71A6NGG8 1288 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 TMEM189-UBE2V1I3L0A0 370 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 KIAA0391O15091 583 aaKnown RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 TADA2AO75478 443 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 KIF4AO95239 1232 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 RPN1P04843 607 aaKnown RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 ADRB2P07550 413 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 NRIP1P48552 1158 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 ACOT2P49753 483 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 SNRPFP62306 86 aaKnown RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 DUSP6Q16828 381 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 UPP1Q16831 310 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 BMT2Q1RMZ1 405 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 CTC1Q2NKJ3 1217 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 ZBTB41Q5SVQ8 909 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 FUT10Q6P4F1 479 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 ENGASEQ8NFI3 743 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 SCFD1Q8WVM8 642 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 HERC2P3Q9BVR0 1158 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 UBE2ZQ9H832 354 aaPredicted RBP12.95□□□□□ -0.34
LIG3-213ENST00000590630 SLC39A2Q9NP94 309 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 CACNG4Q9UBN1 327 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
LIG3-213ENST00000590630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 F8W810 466 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 XPOTO43592 962 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 B3GAT3O94766 335 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 CXCL14O95715 111 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 URODP06132 367 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 HOXD13P35453 343 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 GLUD2P49448 558 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 CLCNKBP51801 687 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 MRPS5P82675 430 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 SOX4Q06945 474 aaPredicted RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 DPYDQ12882 1025 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 ELAVL2Q12926 359 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 PTPN14Q15678 1187 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 USP41Q3LFD5 358 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 ARMCX5Q6P1M9 558 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 DCLRE1AQ6PJP8 1040 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 RBM23Q86U06 439 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 RABGGTAQ92696 567 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 TIGD1Q96MW7 591 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 IGFLR1Q9H665 355 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 ASB7Q9H672 318 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 MRPL17Q9NRX2 175 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 CLDND1Q9NY35 253 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 CGNQ9P2M7 1197 aaKnown RBP12.94□□□□□ -0.34
LIG3-213ENST00000590630 DERAQ9Y315 318 aa12.94□□□□□ -0.34
LIG3-213ENST00000590630 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 MUC3AQ02505 3323 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 PER2O15055 1255 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 TRAPPC3O43617 180 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 IL18RAPO95256 599 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 SRGAP2BP0DMP2 458 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 CYP3A5P20815 502 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 KCNA5P22460 613 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 CA8P35219 290 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 GTF2F1P35269 517 aaKnown RBP eCLIP12.93□□□□□ -0.34
LIG3-213ENST00000590630 DSG1Q02413 1049 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 STK4Q13043 487 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 ADAM15Q13444 863 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 KCNB1Q14721 858 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 ZBTB6Q15916 424 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 KNOP1Q1ED39 458 aaKnown RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 KIAA1841Q6NSI8 718 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 IPO9Q96P70 1041 aaKnown RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 CBWD1Q9BRT8 395 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 EMILIN2Q9BXX0 1053 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 GOLGA2P5Q9HBQ8 144 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 CHST7Q9NS84 486 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 UBQLN1Q9UMX0 589 aaKnown RBP12.93□□□□□ -0.34
LIG3-213ENST00000590630 C2CD2Q9Y426 696 aa12.93□□□□□ -0.34
LIG3-213ENST00000590630 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
LIG3-213ENST00000590630 CUL9Q8IWT3 2517 aa12.92□□□□□ -0.34
LIG3-213ENST00000590630 PODXLO00592 558 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms