RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DENND2CQ68D51 928 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 TRPM8Q7Z2W7 1104 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 FAM71AQ8IYT1 594 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 EPS8L3Q8TE67 593 aaKnown RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 HGSO14964 777 aaPredicted RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 UBOX5O94941 541 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 PYGLP06737 847 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 FESP07332 822 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 VIMP08670 466 aaKnown RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 CHN1P15882 459 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 RFX1P22670 979 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 DHX34Q14147 1143 aaKnown RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 ZNF268Q14587 947 aaPredicted RBP20.51■□□□□ 0.87
MBD3-207ENST00000590550 SLMAPQ14BN4 828 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 TNIP1Q15025 636 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 SPDYE2Q495Y8 402 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 CCDC38Q502W7 563 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 ERMARDQ5T6L9 678 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 LARGE2Q8N3Y3 721 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 FAM129AQ9BZQ8 928 aa20.51■□□□□ 0.87
MBD3-207ENST00000590550 AHCYL1O43865 530 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 RARAP10276 462 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 RPS6P62753 249 aaKnown RBP20.5■□□□□ 0.87
MBD3-207ENST00000590550 GTF2BQ00403 316 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 SEL1L2Q5TEA6 688 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 SYTL5Q8TDW5 730 aaPredicted RBP20.5■□□□□ 0.87
MBD3-207ENST00000590550 SAMD15Q9P1V8 674 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 DPPA5A6NC42 116 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 CFAP73A6NFT4 308 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 FAM187AA6NFU0 413 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 MIF4GDA9UHW6 222 aaKnown RBP20.5■□□□□ 0.87
MBD3-207ENST00000590550 CYP11B1P15538 503 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 IFNAR2P48551 515 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 LMBRD2Q68DH5 695 aaPredicted RBP20.5■□□□□ 0.87
MBD3-207ENST00000590550 C1orf54Q8WWF1 131 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 TLCD1Q96CP7 247 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 DNAJC17Q9NVM6 304 aaKnown RBP20.5■□□□□ 0.87
MBD3-207ENST00000590550 RASAL2Q9UJF2 1139 aa20.5■□□□□ 0.87
MBD3-207ENST00000590550 CLDN3O15551 220 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 MAP3K13O43283 966 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 GSTA1P08263 222 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 BSNDQ8WZ55 320 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 CCDC113Q9H0I3 377 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 ECT2Q9H8V3 914 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 PIDD1Q9HB75 910 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 TCEAL9Q9UHQ7 104 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 UBIAD1Q9Y5Z9 338 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 CTNNA2P26232 953 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 CNGA1P29973 690 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 CHRNA3P32297 505 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 MYBPC2Q14324 1141 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 CWF19L1Q69YN2 538 aaKnown RBP20.49■□□□□ 0.87
MBD3-207ENST00000590550 CD101Q93033 1021 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 G3BP2Q9UN86 482 aaKnown RBP20.49■□□□□ 0.87
MBD3-207ENST00000590550 PCDHA3Q9Y5H8 950 aa20.49■□□□□ 0.87
MBD3-207ENST00000590550 DENND3A2RUS2 1198 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 A6NHS1 94 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 KRT16P08779 473 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 KRT5P13647 590 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 CCND1P24385 295 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 SSTR3P32745 418 aaPredicted RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 NPTX2P47972 431 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 HADHBP55084 474 aaKnown RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 SLC13A5Q86YT5 568 aaPredicted RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 ATG4AQ8WYN0 398 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 ZNF317Q96PQ6 595 aaPredicted RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 DBR1Q9UK59 544 aaKnown RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 SPDYE5A6NIY4 337 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 FOXO6A8MYZ6 492 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 NCALDP61601 193 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 TRIP13Q15645 432 aaPredicted RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 HELQQ8TDG4 1101 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 SHC3Q92529 594 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 GMLQ99445 158 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
MBD3-207ENST00000590550 TBX20Q9UMR3 447 aa20.48■□□□□ 0.87
MBD3-207ENST00000590550 PFASO15067 1338 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 PLSCR1O15162 318 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 RTN3O95197 1032 aaPredicted RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 PDHA1P08559 390 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 ATP2A2P16615 1042 aaKnown RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 TBC1D25Q3MII6 688 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 TMEM161BQ8NDZ6 487 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 FLAD1Q8NFF5 587 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 WNK4Q96J92 1243 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 FAM118BQ9BPY3 351 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 COL2A1P02458 1487 aaPredicted RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 COILP38432 576 aaPredicted RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 MFAP3P55082 362 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 EIF3BP55884 814 aaKnown RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 MXRA7P84157 204 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 PGM5Q15124 567 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 SIX1Q15475 284 aaPredicted RBP20.47■□□□□ 0.87
MBD3-207ENST00000590550 SLC5A9Q2M3M2 681 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 ANO5Q75V66 913 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 KLHL29Q96CT2 875 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 ADAM7Q9H2U9 754 aa20.47■□□□□ 0.87
MBD3-207ENST00000590550 PCYOX1Q9UHG3 505 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms