RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 SPATA31D3P0C874 917 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 KCNE1P15382 129 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 IGFBP6P24592 240 aaPredicted RBP13.18□□□□□ -0.3
TPM4-212ENST00000590180 CLCN4P51793 760 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 AMPD3Q01432 767 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 ITIH3Q06033 890 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 SPAG1Q07617 926 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 BECN1Q14457 450 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 KYAT1Q16773 422 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 UPP1Q16831 310 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 AXDND1Q5T1B0 1012 aaPredicted RBP13.18□□□□□ -0.3
TPM4-212ENST00000590180 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
TPM4-212ENST00000590180 TMC5Q6UXY8 1006 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 SPATA31D4Q6ZUB0 917 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 SUSD6Q92537 303 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM4-212ENST00000590180 KCNN1Q92952 543 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 C18orf25Q96B23 403 aaPredicted RBP13.18□□□□□ -0.3
TPM4-212ENST00000590180 RIPOR3Q96MK2 946 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 MSTO1Q9BUK6 570 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 HAPLN2Q9GZV7 340 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
TPM4-212ENST00000590180 PLEKHA5Q9HAU0 1116 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.18□□□□□ -0.3
TPM4-212ENST00000590180 PANK4Q9NVE7 773 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 SEL1LQ9UBV2 794 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 RCOR1Q9UKL0 485 aa13.18□□□□□ -0.3
TPM4-212ENST00000590180 A0A0B4J269 797 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 PODXLO00592 558 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 OGTO15294 1046 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
TPM4-212ENST00000590180 GCNT3O95395 438 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 GLUD1P00367 558 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 PIGRP01833 764 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 CXCL8P10145 99 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
TPM4-212ENST00000590180 TNFSF9P41273 254 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 MTHFRP42898 656 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 CREMQ03060 361 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 SOX4Q06945 474 aaPredicted RBP13.17□□□□□ -0.3
TPM4-212ENST00000590180 RTP2Q5QGT7 225 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 ELMSAN1Q6PJG2 1045 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 KIF12Q96FN5 646 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 CNTN3Q9P232 1028 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 FNIP2Q9P278 1114 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 PCDHB13Q9Y5F0 798 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
TPM4-212ENST00000590180 TRIP11Q15643 1979 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 I3L4J1 428 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 ALADP13716 330 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 BRCC3P46736 316 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 PPP2R3AQ06190 1150 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 PSMD5Q16401 504 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 ZBTB41Q5SVQ8 909 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 SLC39A4Q6P5W5 647 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 CD300LGQ6UXG3 332 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 MAP4K3Q8IVH8 894 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 GPR65Q8IYL9 337 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 SYCP3Q8IZU3 236 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 POMGNT1Q8WZA1 660 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 SFXN1Q9H9B4 322 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
TPM4-212ENST00000590180 ZDHHC9Q9Y397 364 aa13.16□□□□□ -0.3
TPM4-212ENST00000590180 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 TTC26A0AVF1 554 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 TISP43B9A030 160 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 TGM5O43548 720 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 FGFR3P22607 806 aa13.15□□□□□ -0.3
TPM4-212ENST00000590180 ACOT2P49753 483 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms