RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 PRKCIP41743 596 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 C1QTNF8P60827 252 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 TFAMQ00059 246 aaKnown RBP20.77■□□□□ 0.92
POLR2E-207ENST00000590060 GCNT1Q02742 428 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 ARID5AQ03989 594 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 NCOA4Q13772 614 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 ARHGAP44Q17R89 818 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 GJB7Q6PEY0 223 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 TSGA10Q9BZW7 698 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 ARHGAP20Q9P2F6 1191 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 PHF24Q9UPV7 400 aa20.77■□□□□ 0.92
POLR2E-207ENST00000590060 A0A1W2PQ45 241 aaPredicted RBP20.76■□□□□ 0.91
POLR2E-207ENST00000590060 A0A1W2PQY0 241 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 GPR182O15218 404 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 GFPT2O94808 682 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 CTSHP09668 335 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 THPOP40225 353 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 SMYD5Q6GMV2 418 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 PHLDB3Q6NSJ2 640 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 CEP120Q8N960 986 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 SEMA4DQ92854 862 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 C16orf45Q96MC5 204 aaPredicted RBP20.76■□□□□ 0.91
POLR2E-207ENST00000590060 MTMR12Q9C0I1 747 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 SENP6Q9GZR1 1112 aaPredicted RBP20.76■□□□□ 0.91
POLR2E-207ENST00000590060 CDHR5Q9HBB8 845 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 DERAQ9Y315 318 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 FRMPD3Q5JV73 1810 aa20.76■□□□□ 0.91
POLR2E-207ENST00000590060 XPOTO43592 962 aaKnown RBP20.75■□□□□ 0.91
POLR2E-207ENST00000590060 TMEM132DQ14C87 1099 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 TRAPPC11Q7Z392 1133 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 ARHGEF19Q8IW93 802 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 ACRBPQ8NEB7 543 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 OR5B17Q8NGF7 314 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 ZNF516Q92618 1163 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 JAKMIP2Q96AA8 810 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 TSPAN18Q96SJ8 248 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.75■□□□□ 0.91
POLR2E-207ENST00000590060 UNC93B1Q9H1C4 597 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 C2CD2Q9Y426 696 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 PTPRJQ12913 1337 aa20.75■□□□□ 0.91
POLR2E-207ENST00000590060 USP27XA6NNY8 438 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 EVI5O60447 810 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 LRRN2O75325 713 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 HOXA11P31270 313 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-207ENST00000590060 WNT7BP56706 349 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 YWHAEP62258 255 aaKnown RBP20.74■□□□□ 0.91
POLR2E-207ENST00000590060 NOP14P78316 857 aaKnown RBP20.74■□□□□ 0.91
POLR2E-207ENST00000590060 TWF2Q6IBS0 349 aaKnown RBP20.74■□□□□ 0.91
POLR2E-207ENST00000590060 FAM228AQ86W67 206 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 USP38Q8NB14 1042 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 TMEM40Q8WWA1 233 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 TAF4BQ92750 862 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 HAUS4Q9H6D7 363 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 CHST12Q9NRB3 414 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 AJAP1Q9UKB5 411 aaPredicted RBP20.74■□□□□ 0.91
POLR2E-207ENST00000590060 GRIN2DO15399 1336 aa20.74■□□□□ 0.91
POLR2E-207ENST00000590060 LACTBL1A8MY62 500 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 KRT86O43790 486 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 KIF5CO60282 957 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 TNNT1P13805 278 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 USP8P40818 1118 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 MGAT3Q09327 533 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 PAK2Q13177 524 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 SGSM1Q2NKQ1 1148 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 ZNF699Q32M78 642 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 C10orf76Q5T2E6 689 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 HGSNATQ68CP4 663 aa20.73■□□□□ 0.91
POLR2E-207ENST00000590060 IFIH1Q9BYX4 1025 aaKnown RBP20.73■□□□□ 0.91
POLR2E-207ENST00000590060 PAK6Q9NQU5 681 aaPredicted RBP20.73■□□□□ 0.91
POLR2E-207ENST00000590060 NOC2LQ9Y3T9 749 aaKnown RBP20.73■□□□□ 0.91
POLR2E-207ENST00000590060 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.73■□□□□ 0.91
POLR2E-207ENST00000590060 ARVCFO00192 962 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 LCA5LO95447 670 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 CCL5P13501 91 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 P4HA1P13674 534 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 ZSCAN20P17040 1043 aaPredicted RBP20.72■□□□□ 0.91
POLR2E-207ENST00000590060 PDE6CP51160 858 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 VAV2P52735 878 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 BMS1Q14692 1282 aaKnown RBP20.72■□□□□ 0.91
POLR2E-207ENST00000590060 SLC18A3Q16572 532 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 JADE1Q6IE81 842 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 NYAP1Q6ZVC0 841 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 IRF2BP2Q7Z5L9 587 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 CTU1Q7Z7A3 348 aaKnown RBP20.72■□□□□ 0.91
POLR2E-207ENST00000590060 EFCAB13Q8IY85 973 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 HELQQ8TDG4 1101 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 SHC3Q92529 594 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 DHX38Q92620 1227 aaKnown RBP20.72■□□□□ 0.91
POLR2E-207ENST00000590060 KIF12Q96FN5 646 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 SNX27Q96L92 541 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 RNF208Q9H0X6 261 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 TRMT13Q9NUP7 481 aaKnown RBP20.72■□□□□ 0.91
POLR2E-207ENST00000590060 ITGA11Q9UKX5 1188 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 SQORQ9Y6N5 450 aa20.72■□□□□ 0.91
POLR2E-207ENST00000590060 VNN1O95497 513 aa20.71■□□□□ 0.91
POLR2E-207ENST00000590060 PLEKP08567 350 aaPredicted RBP20.71■□□□□ 0.91
POLR2E-207ENST00000590060 NFICP08651 508 aa20.71■□□□□ 0.91
POLR2E-207ENST00000590060 KRT19P08727 400 aa20.71■□□□□ 0.91
POLR2E-207ENST00000590060 KRT5P13647 590 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms