RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DTWD2Q8NBA8 298 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 AFG1LQ8WV93 481 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 ZNF512BQ96KM6 892 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-209ENST00000589941 CCDC17Q96LX7 622 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 FERD3LQ96RJ6 166 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 MFSD1Q9H3U5 465 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 RAD50Q92878 1312 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 TCRBV5S4A2TA0A5A2 114 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 RB1P06400 928 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 NME1P15531 152 aaKnown RBP9.07□□□□□ -0.96
SMAD4-209ENST00000589941 GBP1P32455 592 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 SOX9P48436 509 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 CLCN5P51795 746 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 GP2P55259 537 aaKnown RBP9.07□□□□□ -0.96
SMAD4-209ENST00000589941 PRKCQQ04759 706 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 TNK2Q07912 1038 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 UBALD2Q8IYN6 164 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 ATP8B4Q8TF62 1192 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 RUBCNQ92622 972 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 IL17RAQ96F46 866 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 HRASLS5Q96KN8 279 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 HSPA12BQ96MM6 686 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 KREMEN1Q96MU8 473 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 HAUS7Q99871 368 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 ALG1Q9BT22 464 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 CCDC8Q9H0W5 538 aaPredicted RBP9.07□□□□□ -0.96
SMAD4-209ENST00000589941 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 INPP5FQ9Y2H2 1132 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 ST14Q9Y5Y6 855 aa9.07□□□□□ -0.96
SMAD4-209ENST00000589941 MRPL42Q9Y6G3 142 aaKnown RBP9.07□□□□□ -0.96
SMAD4-209ENST00000589941 ZNF532Q9HCE3 1301 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 NFIBO00712 420 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 CD8BP10966 210 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 THPOP40225 353 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 ARHGAP1Q07960 439 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 BAATQ14032 418 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-209ENST00000589941 FBXW10Q5XX13 1052 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SYCE2Q6PIF2 218 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SUMF1Q8NBK3 374 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 FEZF2Q8TBJ5 459 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SPPL3Q8TCT6 385 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 S1PR5Q9H228 398 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 POMKQ9H5K3 350 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SEMA3GQ9NS98 782 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SLC5A6Q9Y289 635 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SNX11Q9Y5W9 270 aa9.06□□□□□ -0.96
SMAD4-209ENST00000589941 OAS3Q9Y6K5 1087 aaKnown RBP9.06□□□□□ -0.96
SMAD4-209ENST00000589941 SMG1Q96Q15 3661 aaKnown RBP9.06□□□□□ -0.96
SMAD4-209ENST00000589941 EMSYQ7Z589 1322 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 IGKV6D-41A0A0C4DH26 115 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 RSPH10B2B2RC85 870 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 H3BS24 57 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 KPNA6O60684 536 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 MBD4O95243 580 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 RSPH10BP0C881 870 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 TXNP10599 105 aaKnown RBP9.05□□□□□ -0.96
SMAD4-209ENST00000589941 KIR3DL1P43629 444 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 NASPP49321 788 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-209ENST00000589941 G3BP1Q13283 466 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMAD4-209ENST00000589941 BRDTQ58F21 947 aaPredicted RBP9.05□□□□□ -0.96
SMAD4-209ENST00000589941 RUFY4Q6ZNE9 571 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 CHST3Q7LGC8 479 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 SKAP1Q86WV1 359 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 RNF141Q8WVD5 230 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 MISP3Q96FF7 219 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 COX4I2Q96KJ9 171 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 ERVK-5Q9HDB9 667 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 GPR108Q9NPR9 543 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 NYAP2Q9P242 653 aa9.05□□□□□ -0.96
SMAD4-209ENST00000589941 RALGAPA1Q6GYQ0 2036 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 KAT6AQ92794 2004 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 LAMA4Q16363 1823 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 WASH4PA8MWX3 477 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 HAS3O00219 553 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 TNFRSF10CO14798 259 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 IGSF3O75054 1194 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 CLCN7P51798 805 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 LY6KQ17RY6 165 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 SLC9C2Q5TAH2 1124 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 SERINC5Q86VE9 423 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 C7orf31Q8N865 590 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 SCFD2Q8WU76 684 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 POF1BQ8WVV4 589 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 SEPT8Q92599 483 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-209ENST00000589941 SPATA32Q96LK8 384 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
SMAD4-209ENST00000589941 ISY1Q9ULR0 285 aaKnown RBP9.04□□□□□ -0.96
SMAD4-209ENST00000589941 MYH15Q9Y2K3 1946 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 NKRFO15226 690 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMAD4-209ENST00000589941 F2P00734 622 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 IMPDH2P12268 514 aa9.03□□□□□ -0.96
SMAD4-209ENST00000589941 EDNRBP24530 442 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms