RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SMAP1Q8IYB5 467 aaPredicted RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 DEPDC1BQ8WUY9 529 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 SMARCD2Q92925 531 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 CHFRQ96EP1 664 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 MSANTD3Q96H12 275 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 NLRP4Q96MN2 994 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 UBL7Q96S82 380 aaPredicted RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 TTPALQ9BTX7 342 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 IL25Q9H293 177 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 TRPV4Q9HBA0 871 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 SNTG2Q9NY99 539 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 TAF6LQ9Y6J9 622 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 ANKRD17O75179 2603 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 GON4LQ3T8J9 2241 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 COL5A1P20908 1838 aaPredicted RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 TSC2P49815 1807 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 TRIP11Q15643 1979 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 RELNP78509 3460 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 HELZP42694 1942 aaKnown RBP6.82□□□□□ -1.32
VPS25-204ENST00000589577 CEP192Q8TEP8 1941 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 PLXND1Q9Y4D7 1925 aa6.82□□□□□ -1.32
VPS25-204ENST00000589577 SF3B1O75533 1304 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS25-204ENST00000589577 MYO9AB2RTY4 2548 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ARHGEF37A1IGU5 675 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 H0Y626 953 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ADAMTS3O15072 1205 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ATXN7O15265 892 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 ARHGAP6O43182 974 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 REC8O95072 547 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 TRIM16O95361 564 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ITGA4P13612 1032 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 SDSP20132 328 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 IGFBP6P24592 240 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 OR1D2P34982 312 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 CLK2P49760 499 aaKnown RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 ANTXR2P58335 489 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS25-204ENST00000589577 FCHO2Q0JRZ9 810 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 ELF2Q15723 593 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 FAM171A1Q5VUB5 890 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 PMS2CLQ68D20 193 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 C1orf228Q6PIY5 440 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 CCNI2Q6ZMN8 369 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 RALGPS2Q86X27 583 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 CEP57Q86XR8 500 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 SYNPOQ8N3V7 929 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 TTC8Q8TAM2 541 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ZSCAN18Q8TBC5 510 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 IGDCC4Q8TDY8 1250 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 LRRC3BQ96PB8 259 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 HHIPQ96QV1 700 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 CORO1BQ9BR76 489 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 ZNF577Q9BSK1 485 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 INO80BQ9C086 356 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 NXF3Q9H4D5 531 aaKnown RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 C8orf33Q9H7E9 229 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 GTSE1Q9NYZ3 720 aa6.81□□□□□ -1.32
VPS25-204ENST00000589577 SUCLA2Q9P2R7 463 aaPredicted RBP6.81□□□□□ -1.32
VPS25-204ENST00000589577 A0A087WV48 116 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 HEPACAM2A8MVW5 462 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 J3QKU1 62 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 CHADO15335 359 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 TADA2AO75478 443 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 RHOBTB1O94844 696 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 MICAL2O94851 1124 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 GJA1P17302 382 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 PTPN2P17706 415 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 BCKDHBP21953 392 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 MAPK8P45983 427 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 KPNA1P52294 538 aaPredicted RBP6.8□□□□□ -1.32
VPS25-204ENST00000589577 CDC42EP1Q00587 391 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 MTERF2Q49AM1 385 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 WWC2Q6AWC2 1192 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 FSTL4Q6MZW2 842 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 HEATR3Q7Z4Q2 680 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 CATIPQ7Z7H3 387 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 ZNF654Q8IZM8 581 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 CSGALNACT1Q8TDX6 532 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 LENG9Q96B70 501 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 ZFYVE19Q96K21 471 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 MAP3K14Q99558 947 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 APOL6Q9BWW8 343 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
VPS25-204ENST00000589577 SLC32A1Q9H598 525 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 UBN1Q9NPG3 1134 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 RIC8AQ9NPQ8 531 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 NRBP2Q9NSY0 501 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 TBC1D22BQ9NU19 505 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 MTRRQ9UBK8 725 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 EVLQ9UI08 416 aaPredicted RBP6.8□□□□□ -1.32
VPS25-204ENST00000589577 INVSQ9Y283 1065 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 CDY1Q9Y6F8 540 aa6.8□□□□□ -1.32
VPS25-204ENST00000589577 BOD1L1Q8NFC6 3051 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CASTOR2A6NHX0 329 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms