RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 CDK11BP21127 795 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 EEF1GP26641 437 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 BMPR1AP36894 532 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 CASP4P49662 377 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 AFF1P51825 1210 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 GRIK3Q13003 919 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 MYBPC2Q14324 1141 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 GRIN2CQ14957 1233 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 SEZ6Q53EL9 994 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 APTXQ7Z2E3 356 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 FAM114A1Q8IWE2 563 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 PLVAPQ9BX97 442 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 PCIF1Q9H4Z3 704 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 HSPBP1Q9NZL4 362 aa23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 AGO2Q9UKV8 859 aaKnown RBP23.09■■□□□ 1.29
R3HDM4-204ENST00000589428 AKAP3O75969 853 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 RB1P06400 928 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 FANCCQ00597 558 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 SPAG1Q07617 926 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 KRT31Q15323 416 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 ZNF558Q96NG5 402 aa23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 C11orf84Q9BUA3 381 aaPredicted RBP23.08■■□□□ 1.29
R3HDM4-204ENST00000589428 CARNS1A5YM72 827 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 GARTP22102 1010 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 CEP135Q66GS9 1140 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 COLGALT1Q8NBJ5 622 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 ZSWIM2Q8NEG5 633 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 SNX27Q96L92 541 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 PRDM12Q9H4Q4 367 aa23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 MAGEC2Q9UBF1 373 aaPredicted RBP23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 LIMA1Q9UHB6 759 aaKnown RBP23.08■■□□□ 1.28
R3HDM4-204ENST00000589428 CHD7Q9P2D1 2997 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 C5orf67F2Z3F1 127 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 SLC16A3O15427 465 aaKnown RBP23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 ALDH7A1P49419 539 aaKnown RBP23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 CREBRFQ8IUR6 639 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 GSTCDQ8NEC7 633 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 NRDE2Q9H7Z3 1164 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 MIOSQ9NXC5 875 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 CDH23Q9H251 3354 aa23.07■■□□□ 1.28
R3HDM4-204ENST00000589428 TDRD15B5MCY1 1934 aaKnown RBP23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 FAM189A1O60320 539 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 EXOC3O60645 756 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 GNA14O95837 355 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 THP07101 528 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 CXCL8P10145 99 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 PPM1AP35813 382 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 MARSP56192 900 aaKnown RBP23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 KCNT2Q6UVM3 1135 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 ZNF280BQ86YH2 543 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 XXYLT1Q8NBI6 393 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 SAAL1Q96ER3 474 aa23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 RPF1Q9H9Y2 349 aaKnown RBP23.06■■□□□ 1.28
R3HDM4-204ENST00000589428 EPOPA6NHQ4 379 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 PTGESO14684 152 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 KIAA0391O15091 583 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 LDHAP00338 332 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 SERPINC1P01008 464 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 TNFSF9P41273 254 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 BCAR1P56945 870 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 PPP2R3AQ06190 1150 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 CCDC40Q4G0X9 1142 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 GLRA4Q5JXX5 417 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 ZBTB41Q5SVQ8 909 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 GDPD5Q8WTR4 605 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 GAS2L1Q99501 681 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 TMEM175Q9BSA9 504 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 MKNK1Q9BUB5 465 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 TAB2Q9NYJ8 693 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 IFNKQ9P0W0 207 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 PLAGL2Q9UPG8 496 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 COL4A4P53420 1690 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 CITO14578 2027 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 LRRC10BA6NIK2 292 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 DDHD2O94830 711 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 PBX3P40426 434 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 ACOT2P49753 483 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 GPM6BQ13491 265 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 TRIM5Q9C035 493 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 MTMR10Q9NXD2 777 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 CNTN3Q9P232 1028 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 DNAJB4Q9UDY4 337 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 CPSF3Q9UKF6 684 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 FRMD4BQ9Y2L6 1034 aa23.05■■□□□ 1.28
R3HDM4-204ENST00000589428 GOLGA8IPA6NC78 632 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 GOLGA8JA6NMD2 632 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 H3BNC9 293 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 EPB41P11171 864 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 PSMC2P35998 433 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 MTIF2P46199 727 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 DSC1Q08554 894 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 SLC10A6Q3KNW5 377 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 FAM186BQ8IYM0 893 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 KLHL23Q8NBE8 558 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 ANKRD20A12PQ8NF67 263 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 BORCS6Q96GS4 357 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 FBXL18Q96ME1 805 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 NAP1L5Q96NT1 182 aaPredicted RBP23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 TUBGCP2Q9BSJ2 902 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms