RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 RGS18Q9NS28 235 aa26.76■■□□□ 1.87
RFX1-205ENST00000589239 FAM207AQ9NSI2 230 aaPredicted RBP26.76■■□□□ 1.87
RFX1-205ENST00000589239 ITIH6Q6UXX5 1313 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 KIAA0355O15063 1070 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 N4BP1O75113 896 aaKnown RBP26.75■■□□□ 1.87
RFX1-205ENST00000589239 LRRN2O75325 713 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 TIMP1P01033 207 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 C4BPAP04003 597 aaKnown RBP26.75■■□□□ 1.87
RFX1-205ENST00000589239 TDRD10Q5VZ19 366 aaKnown RBP26.75■■□□□ 1.87
RFX1-205ENST00000589239 C15orf39Q6ZRI6 1047 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 ABHD8Q96I13 439 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 ANK1P16157 1881 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 PON1P27169 355 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 RAB27AP51159 221 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 ZACNQ401N2 412 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 ALKAL1Q6UXT8 129 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 TAS1R2Q8TE23 839 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 ZMAT2Q96NC0 199 aaKnown RBP26.75■■□□□ 1.87
RFX1-205ENST00000589239 PLEKHA5Q9HAU0 1116 aa26.75■■□□□ 1.87
RFX1-205ENST00000589239 CITO14578 2027 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 P4HA2O15460 535 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 ZNF623O75123 536 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 ITGA4P13612 1032 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 RAG1P15918 1043 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 ATF7P17544 494 aaPredicted RBP26.74■■□□□ 1.87
RFX1-205ENST00000589239 BIRC3Q13489 604 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 RNF169Q8NCN4 708 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 LSM14BQ9BX40 385 aaKnown RBP26.74■■□□□ 1.87
RFX1-205ENST00000589239 TSPYL2Q9H2G4 693 aaPredicted RBP26.74■■□□□ 1.87
RFX1-205ENST00000589239 EPHB6O15197 1021 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 PMM2O15305 246 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 ACTN1P12814 892 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 CETN1Q12798 172 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 DUOXA2Q1HG44 320 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 GLRA4Q5JXX5 417 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 SCARA3Q6AZY7 606 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 MRPL10Q7Z7H8 261 aaKnown RBP26.74■■□□□ 1.87
RFX1-205ENST00000589239 CD302Q8IX05 232 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 TMEM130Q8N3G9 435 aa26.74■■□□□ 1.87
RFX1-205ENST00000589239 TMEM191BP0C7N4 346 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 TRIM21P19474 475 aaKnown RBP26.73■■□□□ 1.87
RFX1-205ENST00000589239 EPC2Q52LR7 807 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 SLC24A5Q71RS6 500 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 HACE1Q8IYU2 909 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 SEMA4DQ92854 862 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 APBB2Q92870 758 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 VWCEQ96DN2 955 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 ZFP42Q96MM3 310 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.73■■□□□ 1.876e-9■■■■■ 134.6
RFX1-205ENST00000589239 CNTN3Q9P232 1028 aa26.73■■□□□ 1.87
RFX1-205ENST00000589239 C9IYK1 514 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 TMEM132DQ14C87 1099 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 TRIM65Q6PJ69 517 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 AGMOQ6ZNB7 445 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 ECHDC2Q86YB7 292 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 FBXL13Q8NEE6 735 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 LMO3Q8TAP4 145 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 CPLX3Q8WVH0 158 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 KIF12Q96FN5 646 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 SPTLC3Q9NUV7 552 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 COQ4Q9Y3A0 265 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 C2CD2Q9Y426 696 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 GYPCP04921 128 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 AP3M2P53677 418 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 TBX2Q13207 712 aaPredicted RBP26.72■■□□□ 1.87
RFX1-205ENST00000589239 TRAPPC11Q7Z392 1133 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 ANKRD36BP1Q96IX9 119 aa26.72■■□□□ 1.87
RFX1-205ENST00000589239 INTS2Q9H0H0 1204 aaKnown RBP26.72■■□□□ 1.87
RFX1-205ENST00000589239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.72■■□□□ 1.87
RFX1-205ENST00000589239 MLH1P40692 756 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 DPY19L2P1Q6NXN4 242 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 EHBP1Q8NDI1 1231 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 RAB20Q9NX57 234 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 ENPP3O14638 875 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 VNN1O95497 513 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 SKIP12755 728 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 CSF2RAP15509 400 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 AFF1P51825 1210 aaKnown RBP26.71■■□□□ 1.87
RFX1-205ENST00000589239 GOLGA8FQ08AF8 430 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 GOLGA8DPQ0D2H9 430 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 XKR4Q5GH76 650 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 ZNF598Q86UK7 904 aaKnown RBP26.71■■□□□ 1.87
RFX1-205ENST00000589239 NEK11Q8NG66 645 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 ELMO3Q96BJ8 720 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 GAD1Q99259 594 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 IMPACTQ9P2X3 320 aa26.71■■□□□ 1.87
RFX1-205ENST00000589239 TRIP11Q15643 1979 aa26.7■■□□□ 1.87
RFX1-205ENST00000589239 ALPK3Q96L96 1907 aa26.7■■□□□ 1.87
RFX1-205ENST00000589239 SMIM28A0A1B0GU29 152 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 RNF225M0QZC1 329 aaPredicted RBP26.7■■□□□ 1.86
RFX1-205ENST00000589239 PHACTR2O75167 634 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 NOL4O94818 638 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 TNNC2P02585 160 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 MFSD5Q6N075 450 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 TTYH3Q9C0H2 523 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 SIX2Q9NPC8 291 aa26.7■■□□□ 1.86
RFX1-205ENST00000589239 CST3P01034 146 aaPredicted RBP26.69■■□□□ 1.86
RFX1-205ENST00000589239 HLA-DRAP01903 254 aa26.69■■□□□ 1.86
RFX1-205ENST00000589239 CASP14P31944 242 aa26.69■■□□□ 1.86
RFX1-205ENST00000589239 RFC2P35250 354 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms