RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 DCLK2Q8N568 766 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 LRRC15Q8TF66 581 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 ZBTB45Q96K62 511 aaPredicted RBP12.14□□□□□ -0.47
MRPL54-202ENST00000589174 KXD1Q9BQD3 176 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 HAPLN2Q9GZV7 340 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 FRYLO94915 3013 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 TSC2P49815 1807 aa12.14□□□□□ -0.47
MRPL54-202ENST00000589174 SMIM28A0A1B0GU29 152 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 WDR27A2RRH5 827 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 E9PMD0 336 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 MOSPD3O75425 235 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 NR1I2O75469 434 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 SEC24AO95486 1093 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 VNN2O95498 520 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL54-202ENST00000589174 PROZP22891 400 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 FCARP24071 287 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 CCR2P41597 374 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
MRPL54-202ENST00000589174 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 ATF7IP2Q5U623 682 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
MRPL54-202ENST00000589174 HACE1Q8IYU2 909 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 IGSF22Q8N9C0 903 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 RMDN1Q96DB5 314 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 TCEAL4Q96EI5 215 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
MRPL54-202ENST00000589174 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
MRPL54-202ENST00000589174 C2orf40Q9H1Z8 148 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 ARHGAP28Q9P2N2 729 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 PCDHB6Q9Y5E3 794 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
MRPL54-202ENST00000589174 B3GAT3O94766 335 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 POU2F2P09086 479 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 CEBPBP17676 345 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 NPTX2P47972 431 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 RBM25P49756 843 aaKnown RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 OSTNP61366 133 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 ROR1Q01973 937 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 MRPL58Q14197 206 aaKnown RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 PRSS36Q5K4E3 855 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 C1orf210Q8IVY1 113 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 DEPTORQ8TB45 409 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 C18orf25Q96B23 403 aaPredicted RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 FOXP1Q9H334 677 aaPredicted RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 DDX19AQ9NUU7 478 aaKnown RBP12.12□□□□□ -0.47
MRPL54-202ENST00000589174 DPP7Q9UHL4 492 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 TNFSF13BQ9Y275 285 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 SIT1Q9Y3P8 196 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 CACNA1AO00555 2505 aa12.12□□□□□ -0.47
MRPL54-202ENST00000589174 KIF26AQ9ULI4 1882 aaPredicted RBP12.11□□□□□ -0.47
MRPL54-202ENST00000589174 ARHGEF37A1IGU5 675 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 STK25O00506 426 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 HIP1RO75146 1068 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 ABLIM3O94929 683 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 RHOP08100 348 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 TARSP26639 723 aaKnown RBP12.11□□□□□ -0.47
MRPL54-202ENST00000589174 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
MRPL54-202ENST00000589174 GRM5P41594 1212 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 PEX3P56589 373 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 CREMQ03060 361 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 MLF2Q15773 248 aaPredicted RBP12.11□□□□□ -0.47
MRPL54-202ENST00000589174 DCAF4L1Q3SXM0 396 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 SLC44A4Q53GD3 710 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 TANGO2Q6ICL3 276 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 C1orf186Q6ZWK4 172 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 MCRS1Q96EZ8 462 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 BACE2Q9Y5Z0 518 aa12.11□□□□□ -0.47
MRPL54-202ENST00000589174 F5P12259 2224 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 KANSL1LA0AUZ9 987 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 MED19A0JLT2 244 aaPredicted RBP12.1□□□□□ -0.47
MRPL54-202ENST00000589174 LMNAP02545 664 aaKnown RBP12.1□□□□□ -0.47
MRPL54-202ENST00000589174 MUTP22033 750 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.47
MRPL54-202ENST00000589174 HOXC13P31276 330 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 ID4P47928 161 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 PTGDRQ13258 359 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 TRIM29Q14134 588 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 PABPC1LQ4VXU2 614 aaKnown RBP12.1□□□□□ -0.47
MRPL54-202ENST00000589174 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
MRPL54-202ENST00000589174 LIN9Q5TKA1 542 aa12.1□□□□□ -0.47
MRPL54-202ENST00000589174 RINT1Q6NUQ1 792 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms