RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 NLRC5Q86WI3 1866 aa15.84■□□□□ 0.13
CNN1-208ENST00000588935 PDCD11Q14690 1871 aaKnown RBP15.83■□□□□ 0.12
CNN1-208ENST00000588935 RFXAPO00287 272 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 IL18RAPO95256 599 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 ALDH2P05091 517 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 SLC11A1P49279 550 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 FKBP3Q00688 224 aaKnown RBP15.83■□□□□ 0.12
CNN1-208ENST00000588935 LRRC63Q05C16 580 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 SOX4Q06945 474 aaPredicted RBP15.83■□□□□ 0.12
CNN1-208ENST00000588935 CYP24A1Q07973 514 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 TMEM132DQ14C87 1099 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 ZSCAN23Q3MJ62 389 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 KCNT2Q6UVM3 1135 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 COLGALT2Q8IYK4 626 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 FAM186BQ8IYM0 893 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 CSGALNACT2Q8N6G5 542 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 COLGALT1Q8NBJ5 622 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 FBXL18Q96ME1 805 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 PPP1R10Q96QC0 940 aaKnown RBP15.83■□□□□ 0.12
CNN1-208ENST00000588935 MED15Q96RN5 788 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 TGS1Q96RS0 853 aaKnown RBP15.83■□□□□ 0.12
CNN1-208ENST00000588935 PAAF1Q9BRP4 392 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 CNTN3Q9P232 1028 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 TUBGCP4Q9UGJ1 667 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 FAN1Q9Y2M0 1017 aa15.83■□□□□ 0.12
CNN1-208ENST00000588935 F8W810 466 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 NRP1O14786 923 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 INPPL1O15357 1258 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 GALTP07902 379 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 KCNE1P15382 129 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 LAG3P18627 525 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 TNNI1P19237 187 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
CNN1-208ENST00000588935 BMPR1AP36894 532 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
CNN1-208ENST00000588935 TUSC3Q13454 348 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 MYBPC2Q14324 1141 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 NFIL3Q16649 462 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 CCDC40Q4G0X9 1142 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 ANO6Q4KMQ2 910 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 CD302Q8IX05 232 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 PLEKHO2Q8TD55 490 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 HASPINQ8TF76 798 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 MFSD14AQ96MC6 490 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 ZNF558Q96NG5 402 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 FNBP1Q96RU3 617 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 ZNF576Q9H609 170 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 ASB7Q9H672 318 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 MMRN2Q9H8L6 949 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 AAASQ9NRG9 546 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 PCDHB12Q9Y5F1 795 aa15.82■□□□□ 0.12
CNN1-208ENST00000588935 CCDC192P0DO97 292 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
CNN1-208ENST00000588935 KRT13P13646 458 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 IGFBP6P24592 240 aaPredicted RBP15.81■□□□□ 0.12
CNN1-208ENST00000588935 CLCNKBP51801 687 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 ERVK-21P61565 698 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 DLG4P78352 724 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 PSMD6Q15008 389 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 NAB2Q15742 525 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 RALGAPA2Q2PPJ7 1873 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 EPC2Q52LR7 807 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 SCARA3Q6AZY7 606 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 KLHL23Q8NBE8 558 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 BEST2Q8NFU1 509 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 OR5B17Q8NGF7 314 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 ALG13Q9NP73 1137 aaKnown RBP15.81■□□□□ 0.12
CNN1-208ENST00000588935 SLC38A7Q9NVC3 462 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 DPP3Q9NY33 737 aa15.81■□□□□ 0.12
CNN1-208ENST00000588935 UBQLN1Q9UMX0 589 aaKnown RBP15.81■□□□□ 0.12
CNN1-208ENST00000588935 PTPRJQ12913 1337 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 KRT19P08727 400 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 TMEM191BP0C7N4 346 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 LINC00271P0C7V0 271 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 TRIM49P0CI25 452 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 TRIM49CP0CI26 452 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 ERCC5P28715 1186 aaPredicted RBP15.8■□□□□ 0.12
CNN1-208ENST00000588935 VAMP7P51809 220 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 DSC1Q08554 894 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
CNN1-208ENST00000588935 SURF1Q15526 300 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 ZBTB6Q15916 424 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 TCERG1LQ5VWI1 586 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 FILIP1Q7Z7B0 1213 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 TMEM173Q86WV6 379 aaPredicted RBP15.8■□□□□ 0.12
CNN1-208ENST00000588935 FBXO22Q8NEZ5 403 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
CNN1-208ENST00000588935 ZNF516Q92618 1163 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 CLP1Q92989 425 aaKnown RBP15.8■□□□□ 0.12
CNN1-208ENST00000588935 TMEM175Q9BSA9 504 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 COLEC11Q9BWP8 271 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 SPG21Q9NZD8 308 aa15.8■□□□□ 0.12
CNN1-208ENST00000588935 MYO7AQ13402 2215 aa15.79■□□□□ 0.12
CNN1-208ENST00000588935 EPOPA6NHQ4 379 aa15.79■□□□□ 0.12
CNN1-208ENST00000588935 LRRIQ3A6PVS8 624 aaPredicted RBP15.79■□□□□ 0.12
CNN1-208ENST00000588935 PODXLO00592 558 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms