RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 AUTS2Q8WXX7 1259 aa20.48■□□□□ 0.87
ERCC1-207ENST00000588738 DDX27Q96GQ7 796 aaKnown RBP20.48■□□□□ 0.87
ERCC1-207ENST00000588738 HERC2P3Q9BVR0 1158 aa20.48■□□□□ 0.87
ERCC1-207ENST00000588738 IKZF4Q9H2S9 585 aa20.48■□□□□ 0.87
ERCC1-207ENST00000588738 CPSF3Q9UKF6 684 aaKnown RBP20.48■□□□□ 0.87
ERCC1-207ENST00000588738 SF3B1O75533 1304 aaKnown RBP eCLIP20.48■□□□□ 0.87
ERCC1-207ENST00000588738 LINC01565O15544 149 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 MEFVO15553 781 aaPredicted RBP20.47■□□□□ 0.87
ERCC1-207ENST00000588738 URODP06132 367 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 ADSSP30520 456 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 LTBRP36941 435 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 ACOT2P49753 483 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 NDUFV1P49821 464 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 CLCNKBP51801 687 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 ENOX2Q16206 610 aaKnown RBP20.47■□□□□ 0.87
ERCC1-207ENST00000588738 TJAP1Q5JTD0 557 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 ZBTB41Q5SVQ8 909 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 KIAA1841Q6NSI8 718 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 KRBA2Q6ZNG9 492 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 TAS1R1Q7RTX1 841 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 CD302Q8IX05 232 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 RNF168Q8IYW5 571 aaPredicted RBP20.47■□□□□ 0.87
ERCC1-207ENST00000588738 GLIS3Q8NEA6 775 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 CCDC34Q96HJ3 373 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 TSPAN18Q96SJ8 248 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 GPR62Q9BZJ7 368 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 GOLGA2P5Q9HBQ8 144 aa20.47■□□□□ 0.87
ERCC1-207ENST00000588738 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.47■□□□□ 0.87
ERCC1-207ENST00000588738 LACTBL1A8MY62 500 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 H3BQ06 376 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 B3GAT3O94766 335 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 KIF4AO95239 1232 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 LDHAP00338 332 aaKnown RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 ADRB2P07550 413 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 SRGAP2BP0DMP2 458 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 GARTP22102 1010 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 RPL9P32969 192 aaKnown RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 GLUD2P49448 558 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 POU5F1Q01860 360 aaKnown RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 SOX4Q06945 474 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 ELAVL2Q12926 359 aaKnown RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 PTPN14Q15678 1187 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 UPP1Q16831 310 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 USP41Q3LFD5 358 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 LEXMQ3ZCV2 418 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 KANK3Q6NY19 840 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 EPM2AIP1Q7L775 607 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-207ENST00000588738 ZNF507Q8TCN5 953 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 HASPINQ8TF76 798 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 FAM212AQ96EL1 285 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 KIF12Q96FN5 646 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 EMILIN2Q9BXX0 1053 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 SLC39A2Q9NP94 309 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 EXOC1Q9NV70 894 aa20.46■□□□□ 0.87
ERCC1-207ENST00000588738 TMEM189-UBE2V1I3L0A0 370 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 C2CD2LO14523 706 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 XPOTO43592 962 aaKnown RBP20.45■□□□□ 0.86
ERCC1-207ENST00000588738 KLRC4O43908 158 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 KCNQ1P51787 676 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 DSG1Q02413 1049 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 PSMD2Q13200 908 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 KIAA0319Q5VV43 1072 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 CCDC47Q96A33 483 aaKnown RBP20.45■□□□□ 0.86
ERCC1-207ENST00000588738 C18orf25Q96B23 403 aaPredicted RBP20.45■□□□□ 0.86
ERCC1-207ENST00000588738 CHST7Q9NS84 486 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 UBE4BO95155 1302 aa20.45■□□□□ 0.86
ERCC1-207ENST00000588738 ANK1P16157 1881 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 TRAPPC3O43617 180 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 LILRB3O75022 631 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 CLASP2O75122 1294 aaKnown RBP20.44■□□□□ 0.86
ERCC1-207ENST00000588738 TBX10O75333 385 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 GLP2RO95838 553 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 SPAG1Q07617 926 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 DLX2Q07687 328 aaPredicted RBP20.44■□□□□ 0.86
ERCC1-207ENST00000588738 ZBTB6Q15916 424 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 PUS10Q3MIT2 529 aaKnown RBP20.44■□□□□ 0.86
ERCC1-207ENST00000588738 KMT5BQ4FZB7 885 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 ARMCX5Q6P1M9 558 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 TMEM184AQ6ZMB5 413 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 PPFIBP1Q86W92 1011 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 GPR65Q8IYL9 337 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 FMR1NBQ8N0W7 255 aaPredicted RBP20.44■□□□□ 0.86
ERCC1-207ENST00000588738 FAM213AQ9BRX8 229 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 ASB7Q9H672 318 aa20.44■□□□□ 0.86
ERCC1-207ENST00000588738 UBQLN1Q9UMX0 589 aaKnown RBP20.44■□□□□ 0.86
ERCC1-207ENST00000588738 PODXLO00592 558 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 KIAA0391O15091 583 aaKnown RBP20.43■□□□□ 0.86
ERCC1-207ENST00000588738 RPN1P04843 607 aaKnown RBP20.43■□□□□ 0.86
ERCC1-207ENST00000588738 CNPP09543 421 aaKnown RBP20.43■□□□□ 0.86
ERCC1-207ENST00000588738 BMP1P13497 986 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 CYP3A5P20815 502 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 KLRC2P26717 231 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 HOXD13P35453 343 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 KCNC3Q14003 757 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 FAM171A1Q5VUB5 890 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 LLGL2Q6P1M3 1020 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
ERCC1-207ENST00000588738 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.43■□□□□ 0.86
ERCC1-207ENST00000588738 SCFD1Q8WVM8 642 aa20.43■□□□□ 0.86
ERCC1-207ENST00000588738 KLHL5Q96PQ7 755 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms