RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 RSPO2Q6UXX9 243 aaPredicted RBP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 FBXO18Q8NFZ0 1043 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 UROC1Q96N76 676 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 CCDC94Q9BW85 323 aaPredicted RBP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 MIA3Q5JRA6 1907 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 COL4A3Q01955 1670 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 PHLPP2Q6ZVD8 1323 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 E9PMD0 336 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 TMEM189-UBE2V1I3L0A0 370 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 TRAPPC3O43617 180 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 LRRN2O75325 713 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 HARSP12081 509 aaKnown RBP18.45■□□□□ 0.54
LINC01842-201ENST00000588275 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 HMGN5P82970 282 aaKnown RBP18.45■□□□□ 0.54
LINC01842-201ENST00000588275 UPP1Q16831 310 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 C3orf58Q8NDZ4 430 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 PJA1Q8NG27 643 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 SHDQ96IW2 340 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 HINFPQ9BQA5 517 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 RAB34Q9BZG1 259 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 CDT1Q9H211 546 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 TOPORSQ9NS56 1045 aaPredicted RBP18.45■□□□□ 0.54
LINC01842-201ENST00000588275 DNMT3BQ9UBC3 853 aaKnown RBP18.45■□□□□ 0.54
LINC01842-201ENST00000588275 TNFSF13BQ9Y275 285 aa18.45■□□□□ 0.54
LINC01842-201ENST00000588275 MRPS23Q9Y3D9 190 aaKnown RBP18.45■□□□□ 0.54
LINC01842-201ENST00000588275 SMIM28A0A1B0GU29 152 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 HIP1RO75146 1068 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 LMNAP02545 664 aaKnown RBP18.44■□□□□ 0.54
LINC01842-201ENST00000588275 GRM5P41594 1212 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 NPTX2P47972 431 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 ARPP19P56211 112 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 SOX4Q06945 474 aaPredicted RBP18.44■□□□□ 0.54
LINC01842-201ENST00000588275 DMP1Q13316 513 aaPredicted RBP18.44■□□□□ 0.54
LINC01842-201ENST00000588275 UBXN2BQ14CS0 331 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 UVSSAQ2YD98 709 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 ANKS3Q6ZW76 656 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 C1orf210Q8IVY1 113 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 NPAS3Q8IXF0 933 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 C4orf32Q8N8J7 132 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 ACO2Q99798 780 aaKnown RBP18.44■□□□□ 0.54
LINC01842-201ENST00000588275 TCHPQ9BT92 498 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 MRPL4Q9BYD3 311 aaKnown RBP18.44■□□□□ 0.54
LINC01842-201ENST00000588275 KMT5AQ9NQR1 393 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 GVINP1Q7Z2Y8 2422 aa18.44■□□□□ 0.54
LINC01842-201ENST00000588275 PP2D1A8MPX8 630 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 PODXLO00592 558 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 LRG1P02750 347 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 GLULP15104 373 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 ELF1P32519 619 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 ID4P47928 161 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 PTGDRQ13258 359 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 ZRSR1Q15695 479 aaKnown RBP18.43■□□□□ 0.54
LINC01842-201ENST00000588275 MLF2Q15773 248 aaPredicted RBP18.43■□□□□ 0.54
LINC01842-201ENST00000588275 KRT79Q5XKE5 535 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 ZC3H14Q6PJT7 736 aaKnown RBP18.43■□□□□ 0.54
LINC01842-201ENST00000588275 CD300LGQ6UXG3 332 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 MCRS1Q96EZ8 462 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 TARS2Q9BW92 718 aaKnown RBP18.43■□□□□ 0.54
LINC01842-201ENST00000588275 DLGAP2Q9P1A6 1054 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 DNM3Q9UQ16 869 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 PCDHB6Q9Y5E3 794 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 BACE2Q9Y5Z0 518 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 STK24Q9Y6E0 443 aa18.43■□□□□ 0.54
LINC01842-201ENST00000588275 NOTCH4Q99466 2003 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 KANSL1LA0AUZ9 987 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 PRRG1O14668 218 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 POU2F2P09086 479 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 SP9P0CG40 484 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 CDC25AP30304 524 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 STARD6P59095 220 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 ROR1Q01973 937 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 SLC44A4Q53GD3 710 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 VARS2Q5ST30 1063 aaKnown RBP18.42■□□□□ 0.54
LINC01842-201ENST00000588275 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
LINC01842-201ENST00000588275 RUSC1Q9BVN2 902 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 SLC38A7Q9NVC3 462 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 KCNH3Q9ULD8 1083 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 NUB1Q9Y5A7 615 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 CITO14578 2027 aa18.42■□□□□ 0.54
LINC01842-201ENST00000588275 RHOP08100 348 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 CD72P21854 359 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 PFKPQ01813 784 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 RAD51AP2Q09MP3 1159 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 PDIA5Q14554 519 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 SLC5A9Q2M3M2 681 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 TAS1R3Q7RTX0 852 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 DAW1Q8N136 415 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 IGSF22Q8N9C0 903 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 DRC1Q96MC2 740 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 ZMAT2Q96NC0 199 aaKnown RBP18.41■□□□□ 0.54
LINC01842-201ENST00000588275 ACAP3Q96P50 834 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 BCO2Q9BYV7 579 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 SEMA4AQ9H3S1 761 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 TMEM134Q9H6X4 195 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 SPATA6Q9NWH7 488 aaPredicted RBP18.41■□□□□ 0.54
LINC01842-201ENST00000588275 ANKFY1Q9P2R3 1169 aa18.41■□□□□ 0.54
LINC01842-201ENST00000588275 EP300Q09472 2414 aaPredicted RBP18.4■□□□□ 0.54
LINC01842-201ENST00000588275 WDR27A2RRH5 827 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms