RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SHDQ96IW2 340 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 GOLGA2P5Q9HBQ8 144 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 TUFT1Q9NNX1 390 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 AVENQ9NQS1 362 aaPredicted RBP15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 BACE2Q9Y5Z0 518 aa15.23■□□□□ 0.03
CLPTM1-208ENST00000588274 NCANO14594 1321 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 SPTLC1O15269 473 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 TBC1D4O60343 1298 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 XYLBO75191 536 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 ECI2O75521 394 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 PRKCBP05771 671 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 TGM1P22735 817 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 TKTP29401 623 aaKnown RBP15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 NAMPTP43490 491 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 CLCNKBP51801 687 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 UPP1Q16831 310 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 UVSSAQ2YD98 709 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 PRSS36Q5K4E3 855 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 NT5DC1Q5TFE4 455 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 SLC8B1Q6J4K2 584 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 CEP120Q8N960 986 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 WASF1Q92558 559 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 POLR3CQ9BUI4 534 aaPredicted RBP15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 EPC1Q9H2F5 836 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 PCDHGA2Q9Y5H1 932 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 CDY1Q9Y6F8 540 aa15.22■□□□□ 0.03
CLPTM1-208ENST00000588274 ARHGEF37A1IGU5 675 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 FAM170BA6NMN3 283 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 I3L4J1 428 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 KINO60870 393 aaKnown RBP15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 RHOP08100 348 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 CEBPBP17676 345 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 CYP11B2P19099 503 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 RPS9P46781 194 aaKnown RBP15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 ROR1Q01973 937 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 UBXN2BQ14CS0 331 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 ECM1Q16610 540 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 MAPK6Q16659 721 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 PADI6Q6TGC4 694 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 TPRG1Q6ZUI0 275 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 RTL10Q7L3V2 364 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 CCDC43Q96MW1 224 aaKnown RBP15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 SPATA6Q9NWH7 488 aaPredicted RBP15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 POLIQ9UNA4 740 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 GDAQ9Y2T3 454 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 TRIP11Q15643 1979 aa15.21■□□□□ 0.03
CLPTM1-208ENST00000588274 WDR27A2RRH5 827 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 ABLIM1O14639 778 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 B3GAT3O94766 335 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 ABLIM3O94929 683 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 RPA1P27694 616 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 CCR2P41597 374 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 MAGEA9P43362 315 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 BRCC3P46736 316 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 PFKPQ01813 784 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 RSPO4Q2I0M5 234 aaPredicted RBP15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 TANGO2Q6ICL3 276 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 ALKAL1Q6UXT8 129 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 PTPRHQ9HD43 1115 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 HEBP1Q9NRV9 189 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 GDE1Q9NZC3 331 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 SPTBN2O15020 2390 aa15.2■□□□□ 0.02
CLPTM1-208ENST00000588274 SMIM28A0A1B0GU29 152 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 LAMTOR5O43504 91 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 CSTF1Q05048 431 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 DCAF4L1Q3SXM0 396 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 VARS2Q5ST30 1063 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 TSSK4Q6SA08 328 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 DAW1Q8N136 415 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 TCEAL4Q96EI5 215 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 ZMAT2Q96NC0 199 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 NACC1Q96RE7 527 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 HINFPQ9BQA5 517 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 POLD4Q9HCU8 107 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 ZSCAN32Q9NX65 697 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 F5P12259 2224 aa15.19■□□□□ 0.02
CLPTM1-208ENST00000588274 MOSPD3O75425 235 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 SEC24AO95486 1093 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 MCM7P33993 719 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 FOSBP53539 338 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ANAPC15P60006 121 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 MTAPQ13126 283 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 MRPL58Q14197 206 aaKnown RBP15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ATF7IP2Q5U623 682 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ANKS3Q6ZW76 656 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ZNF461Q8TAF7 563 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 DEPTORQ8TB45 409 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 DNASE1L2Q92874 299 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 ELSPBP1Q96BH3 223 aa15.18■□□□□ 0.02
CLPTM1-208ENST00000588274 MCRS1Q96EZ8 462 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms