RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 WDR35Q9P2L0 1181 aa10.34□□□□□ -0.75
LINC01539-201ENST00000587904 ARHGAP28Q9P2N2 729 aa10.34□□□□□ -0.75
LINC01539-201ENST00000587904 CLEC11AQ9Y240 323 aa10.34□□□□□ -0.75
LINC01539-201ENST00000587904 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 GAS2O43903 313 aaKnown RBP10.33□□□□□ -0.76
LINC01539-201ENST00000587904 PEX10O60683 326 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 ANP32DO95626 131 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 GGPS1O95749 300 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 NAT1P18440 290 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 GARTP22102 1010 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 MAGEA1P43355 309 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 FSTL1Q12841 308 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 MPP3Q13368 585 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 KIAA0753Q2KHM9 967 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 MTERF2Q49AM1 385 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 ANKRD20A8PQ5CZ79 823 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 KDM7AQ6ZMT4 941 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 LCA5Q86VQ0 697 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 ABRAQ8N0Z2 381 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 GPRC5AQ8NFJ5 357 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 SNRNP27Q8WVK2 155 aaKnown RBP10.33□□□□□ -0.76
LINC01539-201ENST00000587904 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 RPGRIP1Q96KN7 1286 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 ZNF570Q96NI8 536 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 CBWD1Q9BRT8 395 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 INTS2Q9H0H0 1204 aaKnown RBP10.33□□□□□ -0.76
LINC01539-201ENST00000587904 POLR3FQ9H1D9 316 aaPredicted RBP10.33□□□□□ -0.76
LINC01539-201ENST00000587904 PORCNQ9H237 461 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 APEX2Q9UBZ4 518 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 ASB3Q9Y575 518 aa10.33□□□□□ -0.76
LINC01539-201ENST00000587904 EMSYQ7Z589 1322 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 LRRD1A4D1F6 860 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TACC1O75410 805 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 FAM107AO95990 144 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ACTN1P12814 892 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 EIF4BP23588 611 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 STAT1P42224 750 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 NAMPTP43490 491 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 SLC26A2P50443 739 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 STAT5BP51692 787 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ELF3P78545 371 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 IFT88Q13099 833 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 LBRQ14739 615 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 RNF10Q8N5U6 811 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 RIN2Q8WYP3 895 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 STK33Q9BYT3 514 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PHACTR1Q9C0D0 580 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 MLXIPQ9HAP2 919 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 USP20Q9Y2K6 914 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TMEM98Q9Y2Y6 226 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 RCCD1A6NED2 376 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 LGR5O75473 907 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ABL1P00519 1130 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PIGRP01833 764 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PGK2P07205 417 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TRIM49P0CI25 452 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TRIM49CP0CI26 452 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ZBTB48P10074 688 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 GTF2H1P32780 548 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 LSP1P33241 339 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TCF7P36402 384 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ARL2P36404 184 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 MAGEA10P43363 369 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PSMC4P43686 418 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 CCNG1P51959 295 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 AMPD2Q01433 879 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TARBP2Q15633 366 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 SNRNP35Q16560 246 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PTGISQ16647 500 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 SGSM1Q2NKQ1 1148 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 Q3C1V9 767 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 KBTBD12Q3ZCT8 623 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 CBWD6Q4V339 395 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PABPC1LQ4VXU2 614 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 CBWD3Q5JTY5 395 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 CBWD5Q5RIA9 395 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 CELF3Q5SZQ8 465 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ALS2CLQ60I27 953 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 IQCEQ6IPM2 695 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PLPPR4Q7Z2D5 763 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TRMT1LQ7Z2T5 733 aaKnown RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 IRF2BP2Q7Z5L9 587 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 NLRP14Q86W24 1093 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 RNF168Q8IYW5 571 aaPredicted RBP10.32□□□□□ -0.76
LINC01539-201ENST00000587904 SMYD1Q8NB12 490 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TMC2Q8TDI7 906 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TEKT4Q8WW24 435 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 PCIF1Q9H4Z3 704 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 KIAA1586Q9HCI6 787 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 MORF4L1Q9UBU8 362 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TRIM10Q9UDY6 481 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TMCO1Q9UM00 188 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 TELO2Q9Y4R8 837 aa10.32□□□□□ -0.76
LINC01539-201ENST00000587904 ADGRA3Q8IWK6 1321 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms