RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 USP34Q70CQ2 3546 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 TMEM189-UBE2V1I3L0A0 370 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 HIP1RO75146 1068 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 CDC25AP30304 524 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 NPTX2P47972 431 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 TRAPPC10P48553 1259 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 ARPP19P56211 112 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 SOX4Q06945 474 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 PABPC1LQ4VXU2 614 aaKnown RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 MTSS1LQ765P7 747 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 C3orf58Q8NDZ4 430 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 MCRS1Q96EZ8 462 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 SHDQ96IW2 340 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 UROC1Q96N76 676 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 ACO2Q99798 780 aaKnown RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 TARS2Q9BW92 718 aaKnown RBP15.54■□□□□ 0.08
ERCC1-205ENST00000587888 DLGAP2Q9P1A6 1054 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 DNM3Q9UQ16 869 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 PCDHB6Q9Y5E3 794 aa15.54■□□□□ 0.08
ERCC1-205ENST00000587888 VWA8A3KMH1 1905 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 PP2D1A8MPX8 630 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 LMNAP02545 664 aaKnown RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 GRM5P41594 1212 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 TOB1P50616 345 aaPredicted RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 STARD6P59095 220 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 ZRSR1Q15695 479 aaKnown RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 ZNF568Q3ZCX4 644 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 SLC44A4Q53GD3 710 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 ALKAL1Q6UXT8 129 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 ANKS3Q6ZW76 656 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 C1orf210Q8IVY1 113 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 PJA1Q8NG27 643 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 DDX27Q96GQ7 796 aaKnown RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 MRPL4Q9BYD3 311 aaKnown RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 RAB34Q9BZG1 259 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 CDT1Q9H211 546 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 KMT5AQ9NQR1 393 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 TOPORSQ9NS56 1045 aaPredicted RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 MRPS23Q9Y3D9 190 aaKnown RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 MTF2Q9Y483 593 aaPredicted RBP15.53■□□□□ 0.08
ERCC1-205ENST00000587888 BACE2Q9Y5Z0 518 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 TRIP11Q15643 1979 aa15.53■□□□□ 0.08
ERCC1-205ENST00000587888 CACNA1HO95180 2353 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 SP9P0CG40 484 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 HARSP12081 509 aaKnown RBP15.52■□□□□ 0.08
ERCC1-205ENST00000587888 GLULP15104 373 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 ELF1P32519 619 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 DMP1Q13316 513 aaPredicted RBP15.52■□□□□ 0.08
ERCC1-205ENST00000587888 IL17AQ16552 155 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 DAW1Q8N136 415 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 IGSF22Q8N9C0 903 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 ZNF461Q8TAF7 563 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 ZMAT2Q96NC0 199 aaKnown RBP15.52■□□□□ 0.08
ERCC1-205ENST00000587888 ACAP3Q96P50 834 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 RUSC1Q9BVN2 902 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 PTPRHQ9HD43 1115 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 KCNH3Q9ULD8 1083 aa15.52■□□□□ 0.08
ERCC1-205ENST00000587888 MYH15Q9Y2K3 1946 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 PHLPP2Q6ZVD8 1323 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 KANSL1LA0AUZ9 987 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 FAM170BA6NMN3 283 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 PODXLO00592 558 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 PRRG1O14668 218 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 SLC16A4O15374 487 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 RHOP08100 348 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 PTPN2P17706 415 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 CD72P21854 359 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 U2AF2P26368 475 aaKnown RBP eCLIP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 ID4P47928 161 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 RAD51AP2Q09MP3 1159 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 UBXN2BQ14CS0 331 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 MLF2Q15773 248 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 DTHD1Q6ZMT9 781 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 C1orf186Q6ZWK4 172 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 TAS1R3Q7RTX0 852 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 NPAS3Q8IXF0 933 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 C18orf25Q96B23 403 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 ZBTB45Q96K62 511 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 PLA2G2FQ9BZM2 168 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 SEMA4AQ9H3S1 761 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 SH2B1Q9NRF2 756 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 SLC38A7Q9NVC3 462 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 RBM19Q9Y4C8 960 aaKnown RBP15.51■□□□□ 0.07
ERCC1-205ENST00000587888 NUB1Q9Y5A7 615 aa15.51■□□□□ 0.07
ERCC1-205ENST00000587888 LRG1P02750 347 aa15.5■□□□□ 0.07
ERCC1-205ENST00000587888 POU2F2P09086 479 aa15.5■□□□□ 0.07
ERCC1-205ENST00000587888 MCF2P10911 925 aa15.5■□□□□ 0.07
ERCC1-205ENST00000587888 ROR1Q01973 937 aa15.5■□□□□ 0.07
ERCC1-205ENST00000587888 SLC5A9Q2M3M2 681 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms