RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 MYL7Q01449 175 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 UBXN1Q04323 297 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 GRIK3Q13003 919 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 SLC10A6Q3KNW5 377 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 ZACNQ401N2 412 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 MIIPQ5JXC2 388 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 CDR2LQ86X02 465 aaPredicted RBP11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 FBXL13Q8NEE6 735 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 DPF3Q92784 378 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 UROC1Q96N76 676 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 EDEM3Q9BZQ6 932 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 IFNKQ9P0W0 207 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 FBXL5Q9UKA1 691 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 USP20Q9Y2K6 914 aa11.19□□□□□ -0.62
CLPTM1-207ENST00000587537 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.19□□□□□ -0.626e-9■■■■■ 35.4
CLPTM1-207ENST00000587537 ARHGEF37A1IGU5 675 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 FGBP02675 491 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 THP07101 528 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 CSF2RAP15509 400 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 ATICP31939 592 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 TNFSF9P41273 254 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 OSTNP61366 133 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 EXOC3L4Q17RC7 722 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 HSP90AA4PQ58FG1 418 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 FIGNQ5HY92 759 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 C15orf39Q6ZRI6 1047 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 ENOSF1Q7L5Y1 443 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 TTC39CQ8N584 583 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 CEP120Q8N960 986 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 PHOSPHO2Q8TCD6 241 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 KIF12Q96FN5 646 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 VPS16Q9H269 839 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 PLCB1Q9NQ66 1216 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 TET1Q8NFU7 2136 aa11.18□□□□□ -0.62
CLPTM1-207ENST00000587537 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 ARL5CA6NH57 179 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 PHACTR2O75167 634 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 P4HA1P13674 534 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 ZNF75DP51815 510 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 TFAMQ00059 246 aaKnown RBP11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 MYO1EQ12965 1108 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 TRPC3Q13507 836 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 ZBTB6Q15916 424 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 ZBTB41Q5SVQ8 909 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 SPECC1LQ69YQ0 1117 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 AGMOQ6ZNB7 445 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 SV2AQ7L0J3 742 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 RTN4RL1Q86UN2 441 aaPredicted RBP11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 JAKMIP2Q96AA8 810 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 SLC9A7Q96T83 725 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 DNAI2Q9GZS0 605 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 NUCKS1Q9H1E3 243 aaKnown RBP11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 VRTNQ9H8Y1 702 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 STK39Q9UEW8 545 aa11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 TDRD15B5MCY1 1934 aaKnown RBP11.17□□□□□ -0.62
CLPTM1-207ENST00000587537 TRIP11Q15643 1979 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 ADCY5O95622 1261 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 C4BPAP04003 597 aaKnown RBP11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 FAM163BP0C2L3 166 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 TRIM49P0CI25 452 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 TRIM49CP0CI26 452 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 TBXAS1P24557 533 aaPredicted RBP11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 AKAP5P24588 427 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 LRPAP1P30533 357 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 GCLMP48507 274 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 YWHAEP62258 255 aaKnown RBP11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 RBP5P82980 135 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 TUSC3Q13454 348 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 BIRC3Q13489 604 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 SEZ6Q53EL9 994 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 NOMO2Q5JPE7 1267 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 C1orf220Q5T0J3 134 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 JADE1Q6IE81 842 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 TRAPPC11Q7Z392 1133 aa11.16□□□□□ -0.62
CLPTM1-207ENST00000587537 CRIPAKQ8N1N5 446 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms