RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SYCP3Q8IZU3 236 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 SMRP1Q8NCR6 262 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ZMAT2Q96NC0 199 aaKnown RBP16.16■□□□□ 0.18
ATG4D-207ENST00000587256 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
ATG4D-207ENST00000587256 A0A0B4J269 797 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 TISP43B9A030 160 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 ANKRD63C9JTQ0 380 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 B3GAT3O94766 335 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 EFEMP2O95967 443 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 ADH1AP07327 375 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 CNPP09543 421 aaKnown RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 EPCAMP16422 314 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 CASP5P51878 434 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 DSG1Q02413 1049 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 SOX4Q06945 474 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 KCNC3Q14003 757 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 ZBTB41Q5SVQ8 909 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 FAM171A1Q5VUB5 890 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 SLFN12LQ6IEE8 588 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 POMGNT1Q8WZA1 660 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 KLHL5Q96PQ7 755 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 APOL5Q9BWW9 433 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 FGFBP2Q9BYJ0 223 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 RPF1Q9H9Y2 349 aaKnown RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 DZANK1Q9NVP4 752 aa16.15■□□□□ 0.18
ATG4D-207ENST00000587256 USP15Q9Y4E8 981 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-207ENST00000587256 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 TMEM189-UBE2V1I3L0A0 370 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 TNFRSF10AO00220 468 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 PODXLO00592 558 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 HOXB8P17481 243 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 CMA1P23946 247 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 SSTR3P32745 418 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 AFMP43652 599 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 CREMQ03060 361 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 KCNA1Q09470 495 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 SMAD2Q15796 467 aaKnown RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 UPP1Q16831 310 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 KIAA0319Q5VV43 1072 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 CEP57Q86XR8 500 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 C18orf25Q96B23 403 aaPredicted RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 FAM212AQ96EL1 285 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 TTPALQ9BTX7 342 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 STRA6Q9BX79 667 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 BLZF1Q9H2G9 400 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 IKZF4Q9H2S9 585 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 GDPD2Q9HCC8 539 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 SERTAD1Q9UHV2 236 aa16.14■□□□□ 0.17
ATG4D-207ENST00000587256 AGO2Q9UKV8 859 aaKnown RBP16.14■□□□□ 0.17
ATG4D-207ENST00000587256 TRIP11Q15643 1979 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 NCOR1O75376 2440 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 TEX28O15482 410 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 TRAPPC3O43617 180 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 FAM189A1O60320 539 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 LILRB3O75022 631 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 CASP1P29466 404 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 SPAG1Q07617 926 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 POSTNQ15063 836 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
ATG4D-207ENST00000587256 RTP2Q5QGT7 225 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 FAM26FQ5R3K3 315 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.13■□□□□ 0.17
ATG4D-207ENST00000587256 GRAMD1CQ8IYS0 662 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 C3orf58Q8NDZ4 430 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 HPS3Q969F9 1004 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 FBXL18Q96ME1 805 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 C7orf25Q9BPX7 421 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 CPSF3Q9UKF6 684 aaKnown RBP16.13■□□□□ 0.17
ATG4D-207ENST00000587256 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
ATG4D-207ENST00000587256 PDCD11Q14690 1871 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 LACTBL1A8MY62 500 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 XPOTO43592 962 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 ACTN4O43707 911 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 GLUD1P00367 558 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 SLFN14P0C7P3 912 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 RPL9P32969 192 aaKnown RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 ACOT2P49753 483 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 CLCN4P51793 760 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 PSMD5Q16401 504 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 CNNM4Q6P4Q7 775 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 SYCE2Q6PIF2 218 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 ELMSAN1Q6PJG2 1045 aa16.12■□□□□ 0.17
ATG4D-207ENST00000587256 PRSS55Q6UWB4 352 aaPredicted RBP16.12■□□□□ 0.17
ATG4D-207ENST00000587256 UNC13DQ70J99 1090 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms