RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 C3orf58Q8NDZ4 430 aa18■□□□□ 0.47
NPC1-205ENST00000587163 GTF3C6Q969F1 213 aa18■□□□□ 0.47
NPC1-205ENST00000587163 MCRS1Q96EZ8 462 aa18■□□□□ 0.47
NPC1-205ENST00000587163 PPP1R10Q96QC0 940 aaKnown RBP18■□□□□ 0.47
NPC1-205ENST00000587163 ADPGKQ9BRR6 497 aa18■□□□□ 0.47
NPC1-205ENST00000587163 POLR3CQ9BUI4 534 aaPredicted RBP18■□□□□ 0.47
NPC1-205ENST00000587163 KIFC3Q9BVG8 833 aa18■□□□□ 0.47
NPC1-205ENST00000587163 OSBPL6Q9BZF3 934 aa18■□□□□ 0.47
NPC1-205ENST00000587163 GOLGA2P5Q9HBQ8 144 aa18■□□□□ 0.47
NPC1-205ENST00000587163 LTB4R2Q9NPC1 389 aa18■□□□□ 0.47
NPC1-205ENST00000587163 DLL3Q9NYJ7 618 aa18■□□□□ 0.47
NPC1-205ENST00000587163 FBXO4Q9UKT5 387 aa18■□□□□ 0.47
NPC1-205ENST00000587163 KCNH3Q9ULD8 1083 aa18■□□□□ 0.47
NPC1-205ENST00000587163 CEP250Q9BV73 2442 aa18■□□□□ 0.47
NPC1-205ENST00000587163 TMEM189-UBE2V1I3L0A0 370 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 I3L4J1 428 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 LAMTOR5O43504 91 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 TKTP29401 623 aaKnown RBP17.99■□□□□ 0.47
NPC1-205ENST00000587163 BRCC3P46736 316 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 PFKPQ01813 784 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 DEPTORQ8TB45 409 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 DDX27Q96GQ7 796 aaKnown RBP17.99■□□□□ 0.47
NPC1-205ENST00000587163 TRIP11Q15643 1979 aa17.99■□□□□ 0.47
NPC1-205ENST00000587163 SHISA7A6NL88 538 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 RHOP08100 348 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 TARSP26639 723 aaKnown RBP17.98■□□□□ 0.47
NPC1-205ENST00000587163 NAMPTP43490 491 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 RBM25P49756 843 aaKnown RBP17.98■□□□□ 0.47
NPC1-205ENST00000587163 SOX4Q06945 474 aaPredicted RBP17.98■□□□□ 0.47
NPC1-205ENST00000587163 FZD5Q13467 585 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 UPP1Q16831 310 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 ZBTB41Q5SVQ8 909 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 TPRG1Q6ZUI0 275 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 CLDN23Q96B33 292 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 MRPS23Q9Y3D9 190 aaKnown RBP17.98■□□□□ 0.47
NPC1-205ENST00000587163 BACE2Q9Y5Z0 518 aa17.98■□□□□ 0.47
NPC1-205ENST00000587163 ARHGEF35A5YM69 484 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 ECI2O75521 394 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 RPA1P27694 616 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 ECM1Q16610 540 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 RSPO4Q2I0M5 234 aaPredicted RBP17.97■□□□□ 0.47
NPC1-205ENST00000587163 DCAF4L1Q3SXM0 396 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 VARS2Q5ST30 1063 aaKnown RBP17.97■□□□□ 0.47
NPC1-205ENST00000587163 ATF7IP2Q5U623 682 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 TANGO2Q6ICL3 276 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 RTL10Q7L3V2 364 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 HEBP1Q9NRV9 189 aa17.97■□□□□ 0.47
NPC1-205ENST00000587163 SMIM28A0A1B0GU29 152 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 NRG2O14511 850 aaPredicted RBP17.96■□□□□ 0.47
NPC1-205ENST00000587163 CEBPBP17676 345 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 GUCY1B3Q02153 619 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 ZNF174Q15697 407 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 ANKS3Q6ZW76 656 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 CEP120Q8N960 986 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 ZBTB44Q8NCP5 570 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 ATRIPQ8WXE1 791 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 NELL1Q92832 810 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 GDE1Q9NZC3 331 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 PCDHGA2Q9Y5H1 932 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 NCOR2Q9Y618 2525 aa17.96■□□□□ 0.47
NPC1-205ENST00000587163 ARHGEF37A1IGU5 675 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 SPTLC1O15269 473 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 TRAPPC3O43617 180 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ABLIM3O94929 683 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 PTPN2P17706 415 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ANAPC15P60006 121 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ROR1Q01973 937 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ST3GAL1Q11201 340 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 TRIM29Q14134 588 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 PPP2R5AQ15172 486 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ALKAL1Q6UXT8 129 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ZNF852Q6ZMS4 543 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ZNF461Q8TAF7 563 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 ERMNQ8TAM6 284 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 TCEAL4Q96EI5 215 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 UROC1Q96N76 676 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 NELL2Q99435 816 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 AVENQ9NQS1 362 aaPredicted RBP17.95■□□□□ 0.46
NPC1-205ENST00000587163 ZSCAN32Q9NX65 697 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 NCDNQ9UBB6 729 aa17.95■□□□□ 0.46
NPC1-205ENST00000587163 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 TBC1D4O60343 1298 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 LILRB5O75023 590 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 SEC24AO95486 1093 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 FCARP24071 287 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 MAGEA9P43362 315 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 RPS9P46781 194 aaKnown RBP17.94■□□□□ 0.46
NPC1-205ENST00000587163 EFNA5P52803 228 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 XKR4Q5GH76 650 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 PRSS36Q5K4E3 855 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 SLC8B1Q6J4K2 584 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 ZNF687Q8N1G0 1237 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 ELSPBP1Q96BH3 223 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 BORCS6Q96GS4 357 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 IFT74Q96LB3 600 aa17.94■□□□□ 0.46
NPC1-205ENST00000587163 ZMAT2Q96NC0 199 aaKnown RBP17.94■□□□□ 0.46
NPC1-205ENST00000587163 CORO1BQ9BR76 489 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms