RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 CNTN3Q9P232 1028 aa22.12■■□□□ 1.13
VAT1-203ENST00000587062 PCDHB13Q9Y5F0 798 aa22.12■■□□□ 1.13
VAT1-203ENST00000587062 TTC28Q96AY4 2481 aa22.12■■□□□ 1.13
VAT1-203ENST00000587062 PI4K2BG5E9Z4 385 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 ABLIM1O14639 778 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 OGTO15294 1046 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 TEX28O15482 410 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 KIF4AO95239 1232 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 CLCNKBP51801 687 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 PPP2R3AQ06190 1150 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 ALCAMQ13740 583 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 POSTNQ15063 836 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 HERC4Q5GLZ8 1057 aaPredicted RBP22.11■■□□□ 1.13
VAT1-203ENST00000587062 CYP26C1Q6V0L0 522 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.11■■□□□ 1.13
VAT1-203ENST00000587062 ZNF720Q7Z2F6 126 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 MAP4K3Q8IVH8 894 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 CD302Q8IX05 232 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 LRRC15Q8TF66 581 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 RPGRIP1Q96KN7 1286 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 PAAF1Q9BRP4 392 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 MSTO1Q9BUK6 570 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 TNMDQ9H2S6 317 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 RPF1Q9H9Y2 349 aaKnown RBP22.11■■□□□ 1.13
VAT1-203ENST00000587062 CD320Q9NPF0 282 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 NUB1Q9Y5A7 615 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 MYH15Q9Y2K3 1946 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 NCOR1O75376 2440 aa22.11■■□□□ 1.13
VAT1-203ENST00000587062 XIRP2A4UGR9 3374 aa22.1■■□□□ 1.13
VAT1-203ENST00000587062 F8W810 466 aa22.1■■□□□ 1.13
VAT1-203ENST00000587062 NMT1P30419 496 aaKnown RBP22.1■■□□□ 1.13
VAT1-203ENST00000587062 UPP1Q16831 310 aa22.1■■□□□ 1.13
VAT1-203ENST00000587062 SFR1Q86XK3 245 aa22.1■■□□□ 1.13
VAT1-203ENST00000587062 PIK3R5Q8WYR1 880 aa22.1■■□□□ 1.13
VAT1-203ENST00000587062 CITO14578 2027 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 MYMKA6NI61 221 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 DCXO43602 365 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 PSMD5Q16401 504 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 SLC10A6Q3KNW5 377 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 C15orf39Q6ZRI6 1047 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 ACCSQ96QU6 501 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 MAGEF1Q9HAY2 307 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 MAN1C1Q9NR34 630 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 OLFML3Q9NRN5 406 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 PANK4Q9NVE7 773 aa22.09■■□□□ 1.13
VAT1-203ENST00000587062 LOC730098B7Z3J9 87 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 PODXLO00592 558 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 GCNT3O95395 438 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 ADALQ6DHV7 355 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 ANKS3Q6ZW76 656 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 PALB2Q86YC2 1186 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 SYCP3Q8IZU3 236 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 B3GALT6Q96L58 329 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 CXCL16Q9H2A7 254 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 CACNG4Q9UBN1 327 aa22.08■■□□□ 1.13
VAT1-203ENST00000587062 UBQLN1Q9UMX0 589 aaKnown RBP22.08■■□□□ 1.13
VAT1-203ENST00000587062 A0A0B4J269 797 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 KRT85P78386 507 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 SEZ6Q53EL9 994 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 ZC2HC1CQ53FD0 456 aaPredicted RBP22.07■■□□□ 1.12
VAT1-203ENST00000587062 TMEM31Q5JXX7 168 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 RTP2Q5QGT7 225 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 TMC5Q6UXY8 1006 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 GPR149Q86SP6 731 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 RNF135Q8IUD6 432 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 GLYCTKQ8IVS8 523 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 PLCD3Q8N3E9 789 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 C12orf76Q8N812 135 aaPredicted RBP22.07■■□□□ 1.12
VAT1-203ENST00000587062 CMASQ8NFW8 434 aaPredicted RBP22.07■■□□□ 1.12
VAT1-203ENST00000587062 DHX58Q96C10 678 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 ACSF2Q96CM8 615 aaPredicted RBP22.07■■□□□ 1.12
VAT1-203ENST00000587062 DNAJC19Q96DA6 116 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 KIF12Q96FN5 646 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 EPHX3Q9H6B9 360 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 TMEM206Q9H813 350 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 GOLGA2P5Q9HBQ8 144 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 VCANP13611 3396 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 TRIP11Q15643 1979 aa22.07■■□□□ 1.12
VAT1-203ENST00000587062 H7C4K7 107 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 LDHAP00338 332 aaKnown RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 CXCL8P10145 99 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 CYP3A5P20815 502 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 FGFR3P22607 806 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 PAX3P23760 479 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 POU5F1Q01860 360 aaKnown RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 DNM1Q05193 864 aaKnown RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 LIN9Q5TKA1 542 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 PRSS55Q6UWB4 352 aaPredicted RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 LNX1Q8TBB1 728 aaPredicted RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 POMGNT1Q8WZA1 660 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 STAMQ92783 540 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 FAM212AQ96EL1 285 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 ZMAT2Q96NC0 199 aaKnown RBP22.06■■□□□ 1.12
VAT1-203ENST00000587062 FIZ1Q96SL8 496 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 PIDD1Q9HB75 910 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 TSHZ2Q9NRE2 1034 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 ZDHHC7Q9NXF8 308 aa22.06■■□□□ 1.12
VAT1-203ENST00000587062 SPTBN5Q9NRC6 3674 aaKnown RBP22.05■■□□□ 1.12
VAT1-203ENST00000587062 CCDC195A0A1B0GUA6 201 aa22.05■■□□□ 1.12
VAT1-203ENST00000587062 TTC26A0AVF1 554 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms