RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 NOMO2Q5JPE7 1267 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 ZMAT2Q96NC0 199 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 CASD1Q96PB1 797 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 PPP1R10Q96QC0 940 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 RBSNQ9H1K0 784 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 KANSL3Q9P2N6 904 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 LIMA1Q9UHB6 759 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 PTPRJQ12913 1337 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 UPP2O95045 317 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 GJB5O95377 273 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 NFICP08651 508 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 DLATP10515 647 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 ATP1A3P13637 1013 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 GTF2H1P32780 548 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 SCNN1GP51170 649 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 AFF1P51825 1210 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 AP3M2P53677 418 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 DLG4P78352 724 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 TMEM132DQ14C87 1099 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 SHHQ15465 462 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 ANKRD20A12PQ8NF67 263 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 URGCPQ8TCY9 931 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 ZNF689Q96CS4 500 aaPredicted RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 KIF12Q96FN5 646 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 RNPC3Q96LT9 517 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 MRPL9Q9BYD2 267 aaKnown RBP18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 SLC38A7Q9NVC3 462 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 INTS13Q9NVM9 706 aa18.38■□□□□ 0.53
PRKCSH-203ENST00000586486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.38■□□□□ 0.531e-8■■□□□ 13
PRKCSH-203ENST00000586486 LRRC10BA6NIK2 292 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 STX10O60499 249 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 THP07101 528 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 TRIM49P0CI25 452 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 TRIM49CP0CI26 452 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 ATP2A2P16615 1042 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 TNNI1P19237 187 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 CYP3A5P20815 502 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 HTRA4P83105 476 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 KRT31Q15323 416 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 NAB2Q15742 525 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 MAN2A1Q16706 1144 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 DCAF17Q5H9S7 520 aaPredicted RBP18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 GLRA4Q5JXX5 417 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 PLAGL2Q9UPG8 496 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 INPP5FQ9Y2H2 1132 aa18.37■□□□□ 0.53
PRKCSH-203ENST00000586486 XPOTO43592 962 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 DUOXA2Q1HG44 320 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 TCERG1LQ5VWI1 586 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 APTXQ7Z2E3 356 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 TMCO2Q7Z6W1 182 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 HERC6Q8IVU3 1022 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 LRRC43Q8N309 656 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 CACTINQ8WUQ7 758 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 POP1Q99575 1024 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 TBC1D13Q9NVG8 400 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 MIOSQ9NXC5 875 aa18.36■□□□□ 0.53
PRKCSH-203ENST00000586486 TMEM191BP0C7N4 346 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 GATMP50440 423 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 TFAMQ00059 246 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 PPP3CAQ08209 521 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 CREBRFQ8IUR6 639 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 CMTR2Q8IYT2 770 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 OR5B17Q8NGF7 314 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 ZNF516Q92618 1163 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 ANKRD36BP1Q96IX9 119 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 MTMR12Q9C0I1 747 aa18.35■□□□□ 0.53
PRKCSH-203ENST00000586486 TBKBP1A7MCY6 615 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 PMM2O15305 246 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 POMCP01189 267 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TNNC2P02585 160 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 AFPP02771 609 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 PRKCSHP14314 528 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 DSC1Q08554 894 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 KCNH2Q12809 1159 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TUSC3Q13454 348 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 ZACNQ401N2 412 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 LMBRD2Q68DH5 695 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 C15orf39Q6ZRI6 1047 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 PRO3102Q9H379 93 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TMEM8AQ9HCN3 771 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 INSL6Q9Y581 213 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 C4BPAP04003 597 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 TPM2P07951 284 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 MXI1P50539 228 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 VWA3BQ502W6 1294 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 SV2AQ7L0J3 742 aa18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 SP7Q8TDD2 431 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 C18orf25Q96B23 403 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-203ENST00000586486 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms