RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CLUL1Q15846 466 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 UPP1Q16831 310 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 HERC4Q5GLZ8 1057 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 GLRA4Q5JXX5 417 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 RESP18Q5W5W9 173 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 GJD3Q8N144 294 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 SLC22A17Q8WUG5 538 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 HDAC7Q8WUI4 952 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 SUSD6Q92537 303 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 DHX58Q96C10 678 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 ZBTB45Q96K62 511 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 MSTO1Q9BUK6 570 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 STRA6Q9BX79 667 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PANK2Q9BZ23 570 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 GPR62Q9BZJ7 368 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 TMEM206Q9H813 350 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 SFXN1Q9H9B4 322 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 PANK4Q9NVE7 773 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 USP25Q9UHP3 1055 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 USP15Q9Y4E8 981 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 STYXL1Q9Y6J8 313 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 VWA8A3KMH1 1905 aa11.35□□□□□ -0.59
SMARCA4-209ENST00000586122 TTC26A0AVF1 554 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 C19orf67A6NJJ6 358 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 KIAA0391O15091 583 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 GCNT3O95395 438 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 GLUD1P00367 558 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 CYP3A5P20815 502 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 MTHFRP42898 656 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 CLCN4P51793 760 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 NUCB2P80303 420 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 CBX2Q14781 532 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 SLC10A6Q3KNW5 377 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 L1TD1Q5T7N2 865 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 ADALQ6DHV7 355 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 LLGL2Q6P1M3 1020 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 SYCE2Q6PIF2 218 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 CYP26C1Q6V0L0 522 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 SPATA32Q96LK8 384 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 RIPOR3Q96MK2 946 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 TTPALQ9BTX7 342 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 PHF7Q9BWX1 381 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 RHOBTB2Q9BYZ6 727 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 TRIM9Q9C026 710 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 ADAM7Q9H2U9 754 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 RPF1Q9H9Y2 349 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 ANK1P16157 1881 aa11.34□□□□□ -0.59
SMARCA4-209ENST00000586122 VCANP13611 3396 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 PODXLO00592 558 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 C2CD2LO14523 706 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 SYN3O14994 580 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 TEX28O15482 410 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 FAM189A1O60320 539 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 MYL1P05976 194 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 ADRB2P07550 413 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CXCL8P10145 99 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 FGFR3P22607 806 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CMA1P23946 247 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 SSTR3P32745 418 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CLCNKBP51801 687 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 ZC2HC1CQ53FD0 456 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 FAM171A1Q5VUB5 890 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 C15orf39Q6ZRI6 1047 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CEP57L1Q8IYX8 460 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CMASQ8NFW8 434 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 RIN2Q8WYP3 895 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 FBXL18Q96ME1 805 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 ZMAT2Q96NC0 199 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 C7orf25Q9BPX7 421 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 PAAF1Q9BRP4 392 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CXCL16Q9H2A7 254 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 ASB7Q9H672 318 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 CPSF3Q9UKF6 684 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 AGO2Q9UKV8 859 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 DERAQ9Y315 318 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 ZDHHC9Q9Y397 364 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 PLXNA3P51805 1871 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 UBE4BO95155 1302 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.6
SMARCA4-209ENST00000586122 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 F8W810 466 aa11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 SLFN14P0C7P3 912 aa11.32□□□□□ -0.6
SMARCA4-209ENST00000586122 EPCAMP16422 314 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms