RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 UPP1Q16831 310 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 UVSSAQ2YD98 709 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 C3orf58Q8NDZ4 430 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 FBXO18Q8NFZ0 1043 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 KIFAP3Q92845 792 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 MTRRQ9UBK8 725 aa22.1■■□□□ 1.13
CLPTM1-204ENST00000585961 SFI1A8K8P3 1242 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 E9PMD0 336 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 STARD6P59095 220 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 PABPC1LQ4VXU2 614 aaKnown RBP22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 FAM184AQ8NB25 1140 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 PJA1Q8NG27 643 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 SHDQ96IW2 340 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 ACO2Q99798 780 aaKnown RBP22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 TARS2Q9BW92 718 aaKnown RBP22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 TNFSF13BQ9Y275 285 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 SPTBN4Q9H254 2564 aa22.09■■□□□ 1.13
CLPTM1-204ENST00000585961 FAM170BA6NMN3 283 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 PP2D1A8MPX8 630 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 HOXA9P31269 272 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 NPTX2P47972 431 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 FXR2P51116 673 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 PTGDRQ13258 359 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 UBXN2BQ14CS0 331 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 HAUS3Q68CZ6 603 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 POTEHQ6S545 545 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 MTSS1LQ765P7 747 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 SNX29Q8TEQ0 813 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 ZMAT2Q96NC0 199 aaKnown RBP22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 TCHPQ9BT92 498 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 PLA2G2FQ9BZM2 168 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 DNM3Q9UQ16 869 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 MRPS23Q9Y3D9 190 aaKnown RBP22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 PCDHB6Q9Y5E3 794 aa22.08■■□□□ 1.13
CLPTM1-204ENST00000585961 TRAPPC3O43617 180 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 HIP1RO75146 1068 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 HARSP12081 509 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 MUTP22033 750 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 TOB1P50616 345 aaPredicted RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 YARSP54577 528 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 ZRSR1Q15695 479 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 ALKAL1Q6UXT8 129 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 ANKS3Q6ZW76 656 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 NPAS3Q8IXF0 933 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 KIAA2013Q8IYS2 634 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 DDX27Q96GQ7 796 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 ZBTB45Q96K62 511 aaPredicted RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 LLPHQ9BRT6 129 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 CCDC94Q9BW85 323 aaPredicted RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 CDT1Q9H211 546 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 NOL7Q9UMY1 257 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 BACE2Q9Y5Z0 518 aa22.07■■□□□ 1.12
CLPTM1-204ENST00000585961 KANSL1LA0AUZ9 987 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 TMEM189-UBE2V1I3L0A0 370 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 RHOP08100 348 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 ELF1P32519 619 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 GRM5P41594 1212 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 ORC2Q13416 577 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 PDIA5Q14554 519 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 MLF2Q15773 248 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 IL17AQ16552 155 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 ZNF568Q3ZCX4 644 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 TAS1R3Q7RTX0 852 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 APBB1IPQ7Z5R6 666 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 MAML2Q8IZL2 1156 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 DAW1Q8N136 415 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 TMEM130Q8N3G9 435 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 DCLK2Q8N568 766 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 C18orf25Q96B23 403 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 UROC1Q96N76 676 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 HINFPQ9BQA5 517 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 KMT5AQ9NQR1 393 aa22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 SPATA6Q9NWH7 488 aaPredicted RBP22.06■■□□□ 1.12
CLPTM1-204ENST00000585961 PODXLO00592 558 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 SLC16A4O15374 487 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 RAD51AP2Q09MP3 1159 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 SLC5A9Q2M3M2 681 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 SEZ6Q53EL9 994 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 VARS2Q5ST30 1063 aaKnown RBP22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 TANGO2Q6ICL3 276 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 ACAP3Q96P50 834 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 CORO1BQ9BR76 489 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 RUSC1Q9BVN2 902 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 MRPL4Q9BYD3 311 aaKnown RBP22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 SEMA4AQ9H3S1 761 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 PTPRHQ9HD43 1115 aa22.05■■□□□ 1.12
CLPTM1-204ENST00000585961 PRRG1O14668 218 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 PTPN2P17706 415 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 KCNK18Q7Z418 384 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 ZNF461Q8TAF7 563 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 TCEAL4Q96EI5 215 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 PLIN2Q99541 437 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 TMEM134Q9H6X4 195 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 CYP4F11Q9HBI6 524 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 TOPORSQ9NS56 1045 aaPredicted RBP22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 KCNH3Q9ULD8 1083 aa22.04■■□□□ 1.12
CLPTM1-204ENST00000585961 SEC24AO95486 1093 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 LRG1P02750 347 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 CEBPBP17676 345 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 TRAPPC10P48553 1259 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms