RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 NOTUMQ6P988 496 aa25.37■■□□□ 1.65
LSM7-203ENST00000585409 CCDC105Q8IYK2 499 aa25.37■■□□□ 1.65
LSM7-203ENST00000585409 MINDY3Q9H8M7 445 aa25.37■■□□□ 1.65
LSM7-203ENST00000585409 POLD4Q9HCU8 107 aa25.37■■□□□ 1.65
LSM7-203ENST00000585409 GVINP1Q7Z2Y8 2422 aa25.37■■□□□ 1.65
LSM7-203ENST00000585409 TDRD15B5MCY1 1934 aaKnown RBP25.37■■□□□ 1.65
LSM7-203ENST00000585409 DCHS1Q96JQ0 3298 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 SPDYE4A6NLX3 237 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 SFI1A8K8P3 1242 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 TRAK2O60296 914 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 EFEMP2O95967 443 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 SOD2P04179 222 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 PRKCBP05771 671 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 NDUFA8P51970 172 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 PRPF4BQ13523 1007 aaKnown RBP25.36■■□□□ 1.65
LSM7-203ENST00000585409 RHOBTB2Q9BYZ6 727 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 FZD8Q9H461 694 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 IGSF9Q9P2J2 1179 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 SERTAD1Q9UHV2 236 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 MYH11P35749 1972 aa25.36■■□□□ 1.65
LSM7-203ENST00000585409 ACKR2O00590 384 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 TSPAN1O60635 241 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 N4BP1O75113 896 aaKnown RBP25.35■■□□□ 1.65
LSM7-203ENST00000585409 MAPTP10636 758 aaKnown RBP25.35■■□□□ 1.65
LSM7-203ENST00000585409 LIG1P18858 919 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 ASIC1P78348 528 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 CNNM4Q6P4Q7 775 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 HACE1Q8IYU2 909 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 RNF168Q8IYW5 571 aaPredicted RBP25.35■■□□□ 1.65
LSM7-203ENST00000585409 CNNM3Q8NE01 707 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 FAM193BQ96PV7 902 aaPredicted RBP25.35■■□□□ 1.65
LSM7-203ENST00000585409 C7orf25Q9BPX7 421 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 RTP3Q9BQQ7 232 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 HERC2P3Q9BVR0 1158 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 TRIM9Q9C026 710 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 MAN1C1Q9NR34 630 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 MARCH5Q9NX47 278 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 ARHGAP28Q9P2N2 729 aa25.35■■□□□ 1.65
LSM7-203ENST00000585409 HOOK1Q9UJC3 728 aaKnown RBP25.35■■□□□ 1.65
LSM7-203ENST00000585409 INPPL1O15357 1258 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 SLC16A4O15374 487 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 POMCP01189 267 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 NCKAP1LP55160 1127 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 STXBP4Q6ZWJ1 553 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 SIX5Q8N196 739 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 CCDC47Q96A33 483 aaKnown RBP25.34■■□□□ 1.65
LSM7-203ENST00000585409 DNAJC19Q96DA6 116 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 RPS6KC1Q96S38 1066 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 ADPGKQ9BRR6 497 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 PANK4Q9NVE7 773 aa25.34■■□□□ 1.65
LSM7-203ENST00000585409 GOLGA6L22H0YM25 854 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 K7ENM7 598 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 N4BP3O15049 544 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 ACTN4O43707 911 aaKnown RBP25.33■■□□□ 1.65
LSM7-203ENST00000585409 ZNF202O95125 648 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 PAPLNO95428 1278 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 URODP06132 367 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 FAM160A1Q05DH4 1040 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 ALCAMQ13740 583 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 CYP26C1Q6V0L0 522 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 CLEC17AQ6ZS10 378 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 TAS1R1Q7RTX1 841 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 COLGALT2Q8IYK4 626 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 SMG8Q8ND04 991 aaKnown RBP25.33■■□□□ 1.65
LSM7-203ENST00000585409 KCNN1Q92952 543 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 KIFC3Q9BVG8 833 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 MRPL4Q9BYD3 311 aaKnown RBP25.33■■□□□ 1.65
LSM7-203ENST00000585409 TRIM6Q9C030 488 aaPredicted RBP25.33■■□□□ 1.65
LSM7-203ENST00000585409 CCDC113Q9H0I3 377 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 WDR6Q9NNW5 1121 aaKnown RBP25.33■■□□□ 1.65
LSM7-203ENST00000585409 UBN1Q9NPG3 1134 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 FBXL21Q9UKT6 434 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 SSX2IPQ9Y2D8 614 aa25.33■■□□□ 1.65
LSM7-203ENST00000585409 C2CD2LO14523 706 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 TEX28O15482 410 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 NARSO43776 548 aaKnown RBP25.32■■□□□ 1.64
LSM7-203ENST00000585409 ADH1AP07327 375 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 AFMP43652 599 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 ANGPT1Q15389 498 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 HAUS6Q7Z4H7 955 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 ADSSL1Q8N142 457 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 DTWD2Q8NBA8 298 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 STAMQ92783 540 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 HVCN1Q96D96 273 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 WNT16Q9UBV4 365 aa25.32■■□□□ 1.64
LSM7-203ENST00000585409 CCDC195A0A1B0GUA6 201 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 ARF4P18085 180 aaPredicted RBP25.31■■□□□ 1.64
LSM7-203ENST00000585409 UBE2HP62256 183 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 DSC1Q08554 894 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 AMHR2Q16671 573 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 KIAA0319Q5VV43 1072 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 SLC27A1Q6PCB7 646 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 KRBA2Q6ZNG9 492 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 SFR1Q86XK3 245 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 TMEM161BQ8NDZ6 487 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 PAGE5Q96GU1 130 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 GOLPH3LQ9H4A5 285 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 ST6GALNAC4Q9H4F1 302 aa25.31■■□□□ 1.64
LSM7-203ENST00000585409 MRPL44Q9H9J2 332 aaKnown RBP25.31■■□□□ 1.64
LSM7-203ENST00000585409 RXFP1Q9HBX9 757 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms