RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 EIF2AK1Q9BQI3 630 aaKnown RBP13.74□□□□□ -0.21
RNF43-208ENST00000584437 TRIM62Q9BVG3 475 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
RNF43-208ENST00000584437 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 PSMD3O43242 534 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 DDX5P17844 614 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 CLEC4GQ6UXB4 293 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 ARHGEF26Q96DR7 871 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 SENP7Q9BQF6 1050 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 TRIM54Q9BYV2 358 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 UNC45AQ9H3U1 944 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 TSC22D4Q9Y3Q8 395 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 COPG1Q9Y678 874 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 EFCAB14O75071 495 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 TDP2O95551 362 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 SNRPAP09012 282 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 MAGEA4P43358 317 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 EPHA7Q15375 998 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 PID1Q7Z2X4 250 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 NOP9Q86U38 636 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 PHF20Q9BVI0 1012 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 GEMIN8Q9NWZ8 242 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 CDV3Q9UKY7 258 aaKnown RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 LAMC1P11047 1609 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 LRRIQ3A6PVS8 624 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 USP17L10C9JJH3 530 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 FOXD4Q12950 439 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 STXBP2Q15833 593 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 KIAA1841Q6NSI8 718 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 MYCBPAPQ8TBZ2 947 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 ANKS1AQ92625 1134 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 EGFL8Q99944 293 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 LXNQ9BS40 222 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 RBAKQ9NYW8 714 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 PCDHGB4Q9UN71 923 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 PJA2O43164 708 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 PTK7Q13308 1070 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 CCDC85BQ15834 202 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 HAUS6Q7Z4H7 955 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 OR6P1Q8NGX9 317 aa13.73□□□□□ -0.21
RNF43-208ENST00000584437 OTUB1Q96FW1 271 aaPredicted RBP13.73□□□□□ -0.21
RNF43-208ENST00000584437 M0R3G1 203 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 SERPINI2O75830 405 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 LTKP29376 864 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 SERPINB1P30740 379 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 AASDHQ4L235 1098 aaPredicted RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 SCFD1Q8WVM8 642 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 TMA16Q96EY4 203 aaKnown RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 RMDN2Q96LZ7 410 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 ANKRD27Q96NW4 1050 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 PRPF18Q99633 342 aaKnown RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 LMCD1Q9NZU5 365 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 CDY2AQ9Y6F7 541 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 GH2P01242 217 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 UBTFL6P0CB48 400 aaPredicted RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 NQO1P15559 274 aaKnown RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 SNAP25P60880 206 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 REXO1L1PQ8IX06 675 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 TSPAN17Q96FV3 270 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 VCPKMTQ9H867 229 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 MANSC1Q9H8J5 431 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 PIGHQ14442 188 aaPredicted RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 TAGAPQ8N103 731 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 KRT35Q92764 455 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 APBA3O96018 575 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 HSD17B3P37058 310 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 FMO5P49326 533 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 DSG1Q02413 1049 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 RBBP7Q16576 425 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 KYAT1Q16773 422 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 LVRNQ6Q4G3 990 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 RNF135Q8IUD6 432 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 FRMD8Q9BZ67 464 aaPredicted RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 NSMCE4AQ9NXX6 385 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 USP21Q9UK80 565 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 AGO2Q9UKV8 859 aaKnown RBP13.72□□□□□ -0.21
RNF43-208ENST00000584437 GRID1Q9ULK0 1009 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms