RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 TIPINQ9BVW5 301 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CXCL16Q9H2A7 254 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TBC1D17Q9HA65 648 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 C17orf75Q9HAS0 396 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 GOLGA2P5Q9HBQ8 144 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 POLD4Q9HCU8 107 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ANKFY1Q9P2R3 1169 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CDH7Q9ULB5 785 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NUB1Q9Y5A7 615 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CDY1Q9Y6F8 540 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PATJQ8NI35 1801 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MYO10Q9HD67 2058 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PRR23AA6NEV1 266 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PP2D1A8MPX8 630 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 H3BQV1 296 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PODXLO00592 558 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 LRG1P02750 347 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 POU2F2P09086 479 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MCF2P10911 925 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FGFR3P22607 806 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ELF1P32519 619 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MATR3P43243 847 aaKnown RBP eCLIP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MCM2P49736 904 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NTHL1P78549 312 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RAB33AQ14088 237 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 UPP1Q16831 310 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PABPC1LQ4VXU2 614 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SPECC1Q5M775 1068 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NT5DC1Q5TFE4 455 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DCLRE1AQ6PJP8 1040 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MPZL3Q6UWV2 235 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ASCL5Q7RTU5 278 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FGF13Q92913 245 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SNX27Q96L92 541 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TARS2Q9BW92 718 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TMEM134Q9H6X4 195 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ARHGAP28Q9P2N2 729 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KCNG1Q9UIX4 513 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RBM19Q9Y4C8 960 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DOCK8Q8NF50 2099 aa9.54□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SMIM28A0A1B0GU29 152 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ANHXE9PGG2 379 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 I3L4J1 428 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PRRG1O14668 218 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ADAM12O43184 909 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PI15O43692 258 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 GUCY2CP25092 1073 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CDC25AP30304 524 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MCM4P33991 863 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 BRCC3P46736 316 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TOB1P50616 345 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SMTNP53814 917 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ATP2C1P98194 919 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ROR1Q01973 937 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NOLC1Q14978 699 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 UVSSAQ2YD98 709 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RINT1Q6NUQ1 792 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ZC3H14Q6PJT7 736 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RTL10Q7L3V2 364 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DAW1Q8N136 415 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 C3orf58Q8NDZ4 430 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ST13P5Q8NFI4 369 aaPredicted RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FGF14Q92915 247 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 BICD1Q96G01 975 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SHDQ96IW2 340 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ACAP3Q96P50 834 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RUSC1Q9BVN2 902 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SLC2A4RGQ9NR83 387 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 BACE2Q9Y5Z0 518 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TRIP11Q15643 1979 aa9.53□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TSC2P49815 1807 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 VWA3AA6NCI4 1184 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 H0YCG3 227 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 H7C4K7 107 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 SYN3O14994 580 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 SLC16A4O15374 487 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 TOM1L1O75674 476 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 CPB1P15086 417 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 ARPP19P56211 112 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 PFKPQ01813 784 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 SOX4Q06945 474 aaPredicted RBP9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 RAD51AP2Q09MP3 1159 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 MAPK7Q13164 816 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 ZNF280DQ6N043 979 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 PHLDB3Q6NSJ2 640 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 PARM1Q6UWI2 310 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 NPAS3Q8IXF0 933 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 ELMOD1Q8N336 334 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 PJA1Q8NG27 643 aa9.52□□□□□ -0.89
CDK5RAP3-229ENST00000583697 RASSF8Q8NHQ8 419 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms