RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CD38P28907 300 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 SRSF2Q01130 221 aaKnown RBP5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 SPDYE7PQ495Y7 208 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 ARMC6Q6NXE6 501 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 KCNK18Q7Z418 384 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 DRC7Q8IY82 874 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 MYOCQ99972 504 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 ACE2Q9BYF1 805 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 SENP6Q9GZR1 1112 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 GREM2Q9H772 168 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 FBXO34Q9NWN3 711 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 NOX1Q9Y5S8 564 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 MAST3O60307 1309 aa5.67□□□□□ -1.5
SMCHD1-208ENST00000583344 GUCY1A2P33402 732 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 CXADRP78310 365 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 HSD11B2P80365 405 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 NOMO1Q15155 1222 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 MUM1L1Q5H9M0 696 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 ZNF529Q6P280 563 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 BOLLQ8N9W6 283 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 FAM98AQ8NCA5 519 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 FATE1Q969F0 183 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 REXO4Q9GZR2 422 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 RNPEPQ9H4A4 650 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 LANCL2Q9NS86 450 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 RBM12Q9NTZ6 932 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 MOCS1Q9NZB8 636 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 SLC23A1Q9UHI7 598 aa5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 AJAP1Q9UKB5 411 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-208ENST00000583344 MGST3O14880 152 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 POMCP01189 267 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 IL2RBP14784 551 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 NACC2Q96BF6 587 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 ORAI2Q96SN7 254 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 LRFN3Q9BTN0 628 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 C14orf119Q9NWQ9 140 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 ACTL7AQ9Y615 435 aa5.65□□□□□ -1.5
SMCHD1-208ENST00000583344 MTHFD2P13995 350 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 GCSHP23434 173 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 PCSK1P29120 753 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 SLC6A9P48067 706 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 TMPRSS15P98073 1019 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 STAT4Q14765 748 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 UBXN2BQ14CS0 331 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 SEPT2Q15019 361 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 ZNF362Q5T0B9 420 aaPredicted RBP5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 Q6ZNX1 250 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 UBE3BQ7Z3V4 1068 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 ADI1Q9BV57 179 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 KIAA1586Q9HCI6 787 aa5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 RUVBL1Q9Y265 456 aaKnown RBP5.64□□□□□ -1.51
SMCHD1-208ENST00000583344 LOC105371045A0A1W2PR82 267 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 GPANK1O95872 356 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 OSMP13725 252 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 SOX5P35711 763 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 MCAMP43121 646 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 MALLQ13021 153 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 OTUD7BQ6GQQ9 843 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 FAM180AQ6UWF9 173 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 LHFPL2Q6ZUX7 228 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 AFAP1L2Q8N4X5 818 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 CAGE1Q8TC20 777 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 CAAP1Q9H8G2 361 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 GALNT9Q9HCQ5 603 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 CASS4Q9NQ75 786 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 CCM2LQ9NUG4 571 aaPredicted RBP5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 TBCCD1Q9NVR7 557 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 DNAJC28Q9NX36 388 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 KCNE5Q9UJ90 142 aa5.63□□□□□ -1.51
SMCHD1-208ENST00000583344 BRINP1O60477 761 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 ZFPL1O95159 310 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 GSPT1P15170 499 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 GPR3P46089 330 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 CYP2A13Q16696 494 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 GJC2Q5T442 439 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 SP5Q6BEB4 398 aaPredicted RBP5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 OR2I1PQ8NGU4 316 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 CCHCR1Q8TD31 782 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 SLC9A6Q92581 669 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 FUBP1Q96AE4 644 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 BOD1Q96IK1 185 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 DUSP26Q9BV47 211 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 TMEM74BQ9NUR3 256 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 PCDHGA2Q9Y5H1 932 aa5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 POLR2AP24928 1970 aaKnown RBP5.62□□□□□ -1.51
SMCHD1-208ENST00000583344 GPR32O75388 356 aa5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 PRKD3O94806 890 aa5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 ENDOD1O94919 500 aa5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 COL11A2P13942 1736 aaPredicted RBP5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 ELLP55199 621 aaPredicted RBP5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 GEN1Q17RS7 908 aa5.61□□□□□ -1.51
SMCHD1-208ENST00000583344 ANO4Q32M45 955 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms