RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 GRM2Q14416 872 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 SLC5A9Q2M3M2 681 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 TRMT61BQ9BVS5 477 aaKnown RBP13.59□□□□□ -0.23
TOP3A-215ENST00000583328 LMAN1LQ9HAT1 526 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 ZFP14Q9HCL3 533 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 CDY1Q9Y6F8 540 aa13.59□□□□□ -0.23
TOP3A-215ENST00000583328 MIA3Q5JRA6 1907 aa13.58□□□□□ -0.23
TOP3A-215ENST00000583328 EPB41L2O43491 1005 aaKnown RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 USO1O60763 962 aaKnown RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 LRP3O75074 770 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 LRG1P02750 347 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 TDGF1P13385 188 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 XBP1P17861 261 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 FGFR3P22607 806 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 RARRES1P49788 294 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 CCR3P51677 355 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 STK3Q13188 491 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 TOB2Q14106 344 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 SIM2Q14190 667 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 POTEHQ6S545 545 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 MAMSTRQ6ZN01 415 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 ZBTB8OSQ8IWT0 167 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 FAM3CQ92520 227 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF274Q96GC6 653 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 HSD17B14Q9BPX1 270 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 CORO1BQ9BR76 489 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 LARP6Q9BRS8 491 aaKnown RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 IER2Q9BTL4 223 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 CXCL16Q9H2A7 254 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
TOP3A-215ENST00000583328 SEMA4GQ9NTN9 838 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 BACE2Q9Y5Z0 518 aa13.58□□□□□ -0.24
TOP3A-215ENST00000583328 FRYLO94915 3013 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 A0A087WWV3 80 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF197O14709 1029 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 CXCL12P48061 93 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 NAB2Q15742 525 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 RUFY3Q7L099 469 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 NOSTRINQ8IVI9 506 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 PIGOQ8TEQ8 1089 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 IRF7Q92985 503 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 FZD8Q9H461 694 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 PDZD7Q9H5P4 517 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
TOP3A-215ENST00000583328 TDRD15B5MCY1 1934 aaKnown RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 ARHGEF37A1IGU5 675 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 TTLL13PA6NNM8 815 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 TMEM189-UBE2V1I3L0A0 370 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 PRRG1O14668 218 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 LIG1P18858 919 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 GDI1P31150 447 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 ARPP19P56211 112 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 FAM78AQ5JUQ0 283 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF461Q8TAF7 563 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 TCEAL4Q96EI5 215 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 ZNF334Q9HCZ1 680 aaPredicted RBP13.56□□□□□ -0.24
TOP3A-215ENST00000583328 PIAS3Q9Y6X2 628 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 F5P12259 2224 aa13.56□□□□□ -0.24
TOP3A-215ENST00000583328 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 HRO43593 1189 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 PRKCBP05771 671 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 ATP2B1P20020 1258 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 FCARP24071 287 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 BRCC3P46736 316 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 FNTBP49356 437 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CLCNKBP51801 687 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 SATB1Q01826 763 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CSRP2Q16527 193 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CALCRLQ16602 461 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 MAPK6Q16659 721 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 C8orf34Q49A92 452 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 GLRA4Q5JXX5 417 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 PRSS36Q5K4E3 855 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
TOP3A-215ENST00000583328 CDCA2Q69YH5 1023 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-215ENST00000583328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms