RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ADPGKQ9BRR6 497 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 OSBPL6Q9BZF3 934 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 C2orf40Q9H1Z8 148 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 GOLGA2P5Q9HBQ8 144 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 KCNH3Q9ULD8 1083 aa17.82■□□□□ 0.44
SREBF1-221ENST00000583080 SHISA7A6NL88 538 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 TMEM189-UBE2V1I3L0A0 370 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 ACKR2O00590 384 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 SPTLC1O15269 473 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 CEBPBP17676 345 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 CLCNKBP51801 687 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 PFKPQ01813 784 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 TSSK4Q6SA08 328 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 PADI6Q6TGC4 694 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 NSUN7Q8NE18 718 aaKnown RBP17.81■□□□□ 0.44
SREBF1-221ENST00000583080 MCRS1Q96EZ8 462 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 PPP1R10Q96QC0 940 aaKnown RBP17.81■□□□□ 0.44
SREBF1-221ENST00000583080 POLD4Q9HCU8 107 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 TUFT1Q9NNX1 390 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 NCDNQ9UBB6 729 aa17.81■□□□□ 0.44
SREBF1-221ENST00000583080 MRPS23Q9Y3D9 190 aaKnown RBP17.81■□□□□ 0.44
SREBF1-221ENST00000583080 TRIP11Q15643 1979 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 SPTBN2O15020 2390 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 JAK2O60674 1132 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 B3GAT3O94766 335 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 RHOP08100 348 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 BRCC3P46736 316 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 ME3Q16798 604 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 VARS2Q5ST30 1063 aaKnown RBP17.8■□□□□ 0.44
SREBF1-221ENST00000583080 DEPTORQ8TB45 409 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 GTF3C6Q969F1 213 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 HEBP1Q9NRV9 189 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 PCDHGA2Q9Y5H1 932 aa17.8■□□□□ 0.44
SREBF1-221ENST00000583080 COL4A2P08572 1712 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 ECI2O75521 394 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 CYP11B2P19099 503 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 MCM7P33993 719 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 NAMPTP43490 491 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
SREBF1-221ENST00000583080 ROR1Q01973 937 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 SOX4Q06945 474 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-221ENST00000583080 UPP1Q16831 310 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 DCAF4L1Q3SXM0 396 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 ZBTB41Q5SVQ8 909 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 NT5DC1Q5TFE4 455 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 CEP120Q8N960 986 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 ZBTB44Q8NCP5 570 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 NELL1Q92832 810 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 CLDN23Q96B33 292 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 NACC1Q96RE7 527 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 POLR3CQ9BUI4 534 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-221ENST00000583080 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
SREBF1-221ENST00000583080 BACE2Q9Y5Z0 518 aa17.79■□□□□ 0.44
SREBF1-221ENST00000583080 ARHGEF35A5YM69 484 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 NRG2O14511 850 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-221ENST00000583080 LILRB5O75023 590 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 FCARP24071 287 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 MAGEA9P43362 315 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 FZD5Q13467 585 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 TANGO2Q6ICL3 276 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 ATRIPQ8WXE1 791 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 TCEAL4Q96EI5 215 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 PRMT8Q9NR22 394 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-221ENST00000583080 ZSCAN32Q9NX65 697 aa17.78■□□□□ 0.44
SREBF1-221ENST00000583080 WDR27A2RRH5 827 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 ST3GAL1Q11201 340 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 GRM2Q14416 872 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 PRSS36Q5K4E3 855 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 ATF7IP2Q5U623 682 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 ANKS3Q6ZW76 656 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 EPC1Q9H2F5 836 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 GDE1Q9NZC3 331 aa17.77■□□□□ 0.44
SREBF1-221ENST00000583080 CACNA1BQ00975 2339 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 ARHGEF37A1IGU5 675 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 RPA1P27694 616 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 RPS9P46781 194 aaKnown RBP17.76■□□□□ 0.43
SREBF1-221ENST00000583080 MTAPQ13126 283 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 PPP2R5AQ15172 486 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 ANKRD1Q15327 319 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 ECM1Q16610 540 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 SLC8B1Q6J4K2 584 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 ZNF852Q6ZMS4 543 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 RTL10Q7L3V2 364 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 ZNF687Q8N1G0 1237 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 UROC1Q96N76 676 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 CORO1BQ9BR76 489 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 AVENQ9NQS1 362 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-221ENST00000583080 F5P12259 2224 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 EPG5Q9HCE0 2579 aa17.76■□□□□ 0.43
SREBF1-221ENST00000583080 TPRP12270 2363 aaKnown RBP17.75■□□□□ 0.43
SREBF1-221ENST00000583080 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 PRRG1O14668 218 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ABLIM3O94929 683 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 SEC24AO95486 1093 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 LRG1P02750 347 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 OR52Z1P0C646 297 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 CCR2P41597 374 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 ARPP19P56211 112 aa17.75■□□□□ 0.43
SREBF1-221ENST00000583080 OSTNP61366 133 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms