RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 TRIM9Q9C026 710 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 PANK4Q9NVE7 773 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 PCDHB13Q9Y5F0 798 aa15.25■□□□□ 0.03
GGA3-215ENST00000582821 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.25■□□□□ 0.03
GGA3-215ENST00000582821 SF3B1O75533 1304 aaKnown RBP eCLIP15.24■□□□□ 0.03
GGA3-215ENST00000582821 TTC26A0AVF1 554 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 CMA1P23946 247 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 RPL9P32969 192 aaKnown RBP15.24■□□□□ 0.03
GGA3-215ENST00000582821 MATR3P43243 847 aaKnown RBP eCLIP15.24■□□□□ 0.03
GGA3-215ENST00000582821 SOX4Q06945 474 aaPredicted RBP15.24■□□□□ 0.03
GGA3-215ENST00000582821 UPP1Q16831 310 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 GLRA4Q5JXX5 417 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 CD300LGQ6UXG3 332 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 SUSD6Q92537 303 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
GGA3-215ENST00000582821 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 SCAND2PQ9GZW5 306 aaPredicted RBP15.24■□□□□ 0.03
GGA3-215ENST00000582821 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.24■□□□□ 0.03
GGA3-215ENST00000582821 FNIP2Q9P278 1114 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 CACNG4Q9UBN1 327 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 KCNH3Q9ULD8 1083 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 EXOC7Q9UPT5 735 aa15.24■□□□□ 0.03
GGA3-215ENST00000582821 VWA8A3KMH1 1905 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 ANKRD63C9JTQ0 380 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 KIF4AO95239 1232 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
GGA3-215ENST00000582821 KLRC2P26717 231 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CA8P35219 290 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CLCN4P51793 760 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CLCNKBP51801 687 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 NUCB2P80303 420 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 POSTNQ15063 836 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CLUL1Q15846 466 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 TPRNQ4KMQ1 711 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 SEZ6Q53EL9 994 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 L1TD1Q5T7N2 865 aaKnown RBP15.23■□□□□ 0.03
GGA3-215ENST00000582821 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CD302Q8IX05 232 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 STAMQ92783 540 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 ACCSQ96QU6 501 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 MSTO1Q9BUK6 570 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
GGA3-215ENST00000582821 CPSF3Q9UKF6 684 aaKnown RBP15.23■□□□□ 0.03
GGA3-215ENST00000582821 FAM237AA0A1B0GTK4 181 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 C2CD2LO14523 706 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 TEX28O15482 410 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 B3GAT3O94766 335 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 ADH1AP07327 375 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 CXCL8P10145 99 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 EPCAMP16422 314 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 CYP3A5P20815 502 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 ADSSP30520 456 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 CREMQ03060 361 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 ITIH3Q06033 890 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 LLGL2Q6P1M3 1020 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 ADHFE1Q8IWW8 467 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 TTPALQ9BTX7 342 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 ADAM7Q9H2U9 754 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 RPF1Q9H9Y2 349 aaKnown RBP15.22■□□□□ 0.03
GGA3-215ENST00000582821 TBC1D7Q9P0N9 293 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 HPSEQ9Y251 543 aa15.22■□□□□ 0.03
GGA3-215ENST00000582821 USP15Q9Y4E8 981 aaPredicted RBP15.22■□□□□ 0.03
GGA3-215ENST00000582821 ANK1P16157 1881 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 PVALEFA0A1B0GWK0 134 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 LACTBL1A8MY62 500 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 TRAPPC3O43617 180 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 GCNT3O95395 438 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 MYBP10242 640 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 FGFR3P22607 806 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 IGFBP6P24592 240 aaPredicted RBP15.21■□□□□ 0.03
GGA3-215ENST00000582821 TNFSF9P41273 254 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 CASP5P51878 434 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 ZP2Q05996 745 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 EHHADHQ08426 723 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 KCNA1Q09470 495 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 ENOX2Q16206 610 aaKnown RBP15.21■□□□□ 0.03
GGA3-215ENST00000582821 FAM171A1Q5VUB5 890 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 PDXDC1Q6P996 788 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.21■□□□□ 0.03
GGA3-215ENST00000582821 GJD3Q8N144 294 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 C3orf58Q8NDZ4 430 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
GGA3-215ENST00000582821 HASPINQ8TF76 798 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 RIN2Q8WYP3 895 aaPredicted RBP15.21■□□□□ 0.03
GGA3-215ENST00000582821 PIK3R5Q8WYR1 880 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 CHAMP1Q96JM3 812 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 ASB7Q9H672 318 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 TMEM206Q9H813 350 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 DPP7Q9UHL4 492 aa15.21■□□□□ 0.03
GGA3-215ENST00000582821 AGO2Q9UKV8 859 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms