RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 WASF3Q9UPY6 502 aa6.95□□□□□ -1.3
TVP23B-210ENST00000582288 MRPS23Q9Y3D9 190 aaKnown RBP6.95□□□□□ -1.3
TVP23B-210ENST00000582288 CACNA1GO43497 2377 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 COL4A2P08572 1712 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 K7ESF4 209 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 ZNF197O14709 1029 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 CCL16O15467 120 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 ERLIN2O94905 339 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 EPN2O95208 641 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PTPN2P17706 415 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PSMC3P17980 439 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 RPL17P18621 184 aaKnown RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 FCARP24071 287 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 RAP1GAPP47736 663 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 SCNN1GP51170 649 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PSMC5P62195 406 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 SATB1Q01826 763 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 LAMTOR4Q0VGL1 99 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PTGDRQ13258 359 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 HSP90AA2PQ14568 343 aaPredicted RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 MXD4Q14582 209 aaPredicted RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PSMD5Q16401 504 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 RTN1Q16799 776 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 Q4G0T1 1027 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 DGKKQ5KSL6 1271 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PLA2G2CQ5R387 149 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 TANGO2Q6ICL3 276 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PRSS55Q6UWB4 352 aaPredicted RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 MIER3Q7Z3K6 550 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 MICU3Q86XE3 530 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 GLYCTKQ8IVS8 523 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 SYNPOQ8N3V7 929 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 SLC7A14Q8TBB6 771 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 E2F7Q96AV8 911 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 ZC3H10Q96K80 434 aaKnown RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 B3GALT6Q96L58 329 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 ZFP42Q96MM3 310 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 NFKBIZQ9BYH8 718 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 PLA2G2FQ9BZM2 168 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 CSRNP2Q9H175 543 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 MINDY3Q9H8M7 445 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 TRPV4Q9HBA0 871 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 NDRG2Q9UN36 371 aaKnown RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 POLIQ9UNA4 740 aa6.94□□□□□ -1.3
TVP23B-210ENST00000582288 RBM8AQ9Y5S9 174 aaKnown RBP6.94□□□□□ -1.3
TVP23B-210ENST00000582288 SPTBN2O15020 2390 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CYP3A7-CYP3A51PA0A087WV96 503 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CCDC196A0A1B0GTZ2 297 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 ARHGEF37A1IGU5 675 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 SRRM3A6NNA2 597 aaPredicted RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 DDX11L8A8MPP1 907 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CHURC1-FNTBB4DL54 471 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 F8W810 466 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 ARNTLO00327 626 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 ZBTB43O43298 467 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 TSPAN1O60635 241 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 RHOP08100 348 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CYP3A7P24462 503 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 QARSP47897 775 aaKnown RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 FNTBP49356 437 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 PTENP60484 403 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 TUSC3Q13454 348 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 GAS6Q14393 721 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 PRSS36Q5K4E3 855 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 TTC22Q5TAA0 569 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 FAM171A1Q5VUB5 890 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 MOXD1Q6UVY6 613 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CEP68Q76N32 757 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CACNA2D4Q7Z3S7 1137 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 FERMT3Q86UX7 667 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 LEMD2Q8NC56 503 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 GAB3Q8WWW8 586 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 SMARCD2Q92925 531 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 MCRS1Q96EZ8 462 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 CCDC136Q96JN2 1154 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 ASB16Q96NS5 453 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 APOL6Q9BWW8 343 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 EIF2AQ9BY44 585 aaKnown RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 TRIM6Q9C030 488 aaPredicted RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 GPR88Q9GZN0 384 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
TVP23B-210ENST00000582288 VPS45Q9NRW7 570 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 HCFC1R1Q9NWW0 138 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 BACE2Q9Y5Z0 518 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 PIAS3Q9Y6X2 628 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 DMXL2Q8TDJ6 3036 aa6.93□□□□□ -1.3
TVP23B-210ENST00000582288 TDRD15B5MCY1 1934 aaKnown RBP6.92□□□□□ -1.3
TVP23B-210ENST00000582288 GREB1Q4ZG55 1949 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 A0A1B0GUA9 196 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 TMEM150BA6NC51 233 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 RNF223E7ERA6 249 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 TMEM189-UBE2V1I3L0A0 370 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 CHMP2AO43633 222 aa6.92□□□□□ -1.3
TVP23B-210ENST00000582288 EDIL3O43854 480 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms