RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PPP1R16BQ96T49 567 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
SRSF1-204ENST00000581979 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 STYXL1Q9Y6J8 313 aa13.63□□□□□ -0.23
SRSF1-204ENST00000581979 A0A087WZ62 844 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 GTPBP10A4D1E9 387 aaKnown RBP13.62□□□□□ -0.23
SRSF1-204ENST00000581979 EPHB6O15197 1021 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 EXTL3O43909 919 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 VTNP04004 478 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 EDN1P05305 212 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 ADRB2P07550 413 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 PTENP60484 403 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 DLG4P78352 724 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 MYL7Q01449 175 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 POU5F1BQ06416 359 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 TMEM132AQ24JP5 1023 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 ZPBP2Q6X784 338 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 USP37Q86T82 979 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 NME8Q8N427 588 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 GDPD5Q8WTR4 605 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 ZBTB45Q96K62 511 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-204ENST00000581979 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 SCLT1Q96NL6 688 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 YME1L1Q96TA2 773 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 FDXACB1Q9BRP7 624 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-204ENST00000581979 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 EDEM3Q9BZQ6 932 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 KIAA1586Q9HCI6 787 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 ZNHIT6Q9NWK9 470 aaKnown RBP13.62□□□□□ -0.23
SRSF1-204ENST00000581979 GCNT4Q9P109 453 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 AGO2Q9UKV8 859 aaKnown RBP13.62□□□□□ -0.23
SRSF1-204ENST00000581979 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
SRSF1-204ENST00000581979 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 ENPP3O14638 875 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 N4BP1O75113 896 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 UPP2O95045 317 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 LDHAP00338 332 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 SLC9A1P19634 815 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 MBTD1Q05BQ5 628 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CYP26C1Q6V0L0 522 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 TMTC1Q8IUR5 882 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 DNAJC7Q99615 494 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 C17orf80Q9BSJ5 609 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 TCHPQ9BT92 498 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 PRMT7Q9NVM4 692 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CEP72Q9P209 647 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 TRPV2Q9Y5S1 764 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 TTC3P53804 2025 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 SOWAHDA6NJG2 315 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 M0QZ92 97 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 ACKR2O00590 384 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CLDN3O15551 220 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 HARSP12081 509 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 FECHP22830 423 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 PON1P27169 355 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 POLR2FP61218 127 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CYP24A1Q07973 514 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CETN1Q12798 172 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 PRPF4BQ13523 1007 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 SKIV2LQ15477 1246 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CBWD6Q4V339 395 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CBWD3Q5JTY5 395 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CBWD5Q5RIA9 395 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 RRAGAQ7L523 313 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 PLEKHO2Q8TD55 490 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CCDC127Q96BQ5 260 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 MFSD14AQ96MC6 490 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 ACO2Q99798 780 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 CELF4Q9BZC1 486 aaKnown RBP13.61□□□□□ -0.23
SRSF1-204ENST00000581979 FZD8Q9H461 694 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 NLRC4Q9NPP4 1024 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 COG5Q9UP83 839 aa13.61□□□□□ -0.23
SRSF1-204ENST00000581979 NCOR1O75376 2440 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 A0A0B4J269 797 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 TOM1L1O75674 476 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 NOL4O94818 638 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 GCLMP48507 274 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 ACOT2P49753 483 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 GPC3P51654 580 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 EPC2Q52LR7 807 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 ATF7IP2Q5U623 682 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 FAM43BQ6ZT52 329 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-204ENST00000581979 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
SRSF1-204ENST00000581979 KIAA0319LQ8IZA0 1049 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 FBXO22Q8NEZ5 403 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 TMC2Q8TDI7 906 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 HAPLN2Q9GZV7 340 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 GANQ9H2C0 597 aa13.6□□□□□ -0.23
SRSF1-204ENST00000581979 RC3H2Q9HBD1 1191 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms