RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 MCM3APO60318 1980 aa6.65□□□□□ -1.34
RNU4ATAC-201ENST00000580972 MROH7Q68CQ1 1323 aa6.65□□□□□ -1.35
RNU4ATAC-201ENST00000580972 MOXD2PA6NHM9 499 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ARVCFO00192 962 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KIAA0391O15091 583 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 P4HA2O15460 535 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ARHGAP6O43182 974 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZNF500O60304 480 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 EVI5O60447 810 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 STX10O60499 249 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PQBP1O60828 265 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 N4BP1O75113 896 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PHACTR2O75167 634 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 RPS6KA5O75582 802 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CABYRO75952 493 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CLSTN1O94985 981 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SGPL1O95470 568 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 LDHAP00338 332 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CKBP12277 381 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SCP2P22307 547 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 HNRNPH3P31942 346 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GTF2H1P32780 548 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ABCD1P33897 745 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SOX5P35711 763 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 USP8P40818 1118 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GRM5P41594 1212 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GFPT1Q06210 699 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PTK7Q13308 1070 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ORC1Q13415 861 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NCOA4Q13772 614 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GPNMBQ14956 572 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ASTE1Q2TB18 679 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TAF3Q5VWG9 929 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CYP26C1Q6V0L0 522 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 IRF2BP2Q7Z5L9 587 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CTU1Q7Z7A3 348 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PALB2Q86YC2 1186 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TMTC1Q8IUR5 882 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 WDR49Q8IV35 697 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PPM1KQ8N3J5 372 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FBXL13Q8NEE6 735 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CXorf38Q8TB03 319 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 LNX1Q8TBB1 728 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 RABGGTAQ92696 567 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ZNF333Q96JL9 665 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 C16orf45Q96MC5 204 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GLT1D1Q96MS3 346 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NT5C1BQ96P26 610 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SPAG5Q96R06 1193 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TSEN34Q9BSV6 310 aaKnown RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PACSIN1Q9BY11 444 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 IRX2Q9BZI1 471 aaPredicted RBP6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SDCBP2Q9H190 292 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 XYLT2Q9H1B5 865 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 HAUS4Q9H6D7 363 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 GOLGA2P5Q9HBQ8 144 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TAS2R14Q9NYV8 317 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 OGDHLQ9ULD0 1010 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PADI3Q9ULW8 664 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PLAGL2Q9UPG8 496 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NOD1Q9Y239 953 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 COQ4Q9Y3A0 265 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 IPPQ9Y573 584 aa6.64□□□□□ -1.35
RNU4ATAC-201ENST00000580972 A0A087X0T9 212 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 M0QZ92 97 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DNM1LO00429 736 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DDX3XO00571 662 aaKnown RBP eCLIP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PTGESO14684 152 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PMM2O15305 246 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CYP26A1O43174 497 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 HCRTO43612 131 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NDUFA10O95299 355 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ITGB3P05106 788 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CFHP08603 1231 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KRT19P08727 400 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TMEM191BP0C7N4 346 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FAM228BP0C875 321 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ATF7P17544 494 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CHRNB2P17787 502 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 ACO1P21399 889 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 POLR2BP30876 1174 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 STAT1P42224 750 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CDK7P50613 346 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 CDR1P51861 262 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KIF11P52732 1056 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NOP14P78316 857 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 PTK2Q05397 1052 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 KLHL30Q0D2K2 578 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DSC3Q14574 896 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TMEM132DQ14C87 1099 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 DCAF4L1Q3SXM0 396 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TRIM60Q495X7 471 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 FAM26DQ5JW98 314 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 TWF2Q6IBS0 349 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NOTUMQ6P988 496 aa6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 NOP9Q86U38 636 aaKnown RBP6.63□□□□□ -1.35
RNU4ATAC-201ENST00000580972 RPAINQ86UA6 219 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms