RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 LMO3Q8TAP4 145 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TAS1R2Q8TE23 839 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TMX1Q9H3N1 280 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ASB7Q9H672 318 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SIX2Q9NPC8 291 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CEP72Q9P209 647 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 COQ4Q9Y3A0 265 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ANK1P16157 1881 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PHACTR2O75167 634 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RECQL4O94761 1208 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NFICP08651 508 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TMEM191BP0C7N4 346 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 AKAP5P24588 427 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZBED6P86452 979 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LRMPQ12912 555 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 JADE1Q6IE81 842 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NECAB2Q7Z6G3 386 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CD302Q8IX05 232 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SMG8Q8ND04 991 aaKnown RBP14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZNF397Q8NF99 534 aaPredicted RBP14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SEMA4DQ92854 862 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ANKRD36BP1Q96IX9 119 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 EDEM3Q9BZQ6 932 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KCNF1Q9H3M0 494 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 HIPK3Q9H422 1215 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NLRC4Q9NPP4 1024 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 FAM105AQ9NUU6 356 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RAB20Q9NX57 234 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PARP2Q9UGN5 583 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PCDHB2Q9Y5E7 798 aa14.96□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CITO14578 2027 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 MGEA5O60502 916 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LRRN2O75325 713 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TNNC2P02585 160 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 UCHL3P15374 230 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DSC3Q14574 896 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SNX27Q96L92 541 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PANX2Q96RD6 677 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 IFIH1Q9BYX4 1025 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PLEKHA5Q9HAU0 1116 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 FHOD1Q9Y613 1164 aa14.95□□□□□ -0.02
CDK5RAP3-219ENST00000580670 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 HLA-DRAP01903 254 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TMEM132DQ14C87 1099 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LRRC26Q2I0M4 334 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 GJB7Q6PEY0 223 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RRAGAQ7L523 313 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TRAPPC11Q7Z392 1133 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 HACE1Q8IYU2 909 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 OR8K1Q8NGG5 319 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 BAP1Q92560 729 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ADAM2Q99965 735 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■□□ 18.9
CDK5RAP3-219ENST00000580670 ABHD10Q9NUJ1 306 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 APEX2Q9UBZ4 518 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 FBXL5Q9UKA1 691 aa14.94□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NBNO60934 754 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 VNN1O95497 513 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NCOA4Q13772 614 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TSR1Q2NL82 804 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KIF12Q96FN5 646 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DNAJC7Q99615 494 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PI4K2AQ9BTU6 479 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TRAIPQ9BWF2 469 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PPP1R12CQ9BZL4 782 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 KLK14Q9P0G3 267 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 C2CD2Q9Y426 696 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 LRRC53A6NM62 1247 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NRDCO43847 1150 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ITGA4P13612 1032 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RAB27AP51159 221 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 WDR44Q5JSH3 913 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 IQCEQ6IPM2 695 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PHLDB3Q6NSJ2 640 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 PDXDC1Q6P996 788 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ALKAL1Q6UXT8 129 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NT5DC4Q86YG4 428 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 NT5C1BQ96P26 610 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CXCL16Q9H2A7 254 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TMEM39AQ9NV64 488 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CNTN3Q9P232 1028 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 DNAJC12Q9UKB3 198 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TBX21Q9UL17 535 aa14.93□□□□□ -0.02
CDK5RAP3-219ENST00000580670 TRIP11Q15643 1979 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 ZC3H11AO75152 810 aaKnown RBP eCLIP14.92□□□□□ -0.026e-7■■■□□ 17.4
CDK5RAP3-219ENST00000580670 CLSTN1O94985 981 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CLTBP09497 229 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 SKILP12757 684 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 EN2P19622 333 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 IBSPP21815 317 aaPredicted RBP14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 RFX1P22670 979 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CYP2C18P33260 490 aa14.92□□□□□ -0.02
CDK5RAP3-219ENST00000580670 CCL23P55773 120 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms