RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 IPPQ9Y573 584 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 PCDHGA5Q9Y5G8 931 aa8.61□□□□□ -1.03
SMARCE1-217ENST00000580654 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 HYAL3O43820 417 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 EDIL3O43854 480 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 RHOP08100 348 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 ITGA4P13612 1032 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 CEACAM1P13688 526 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 GDI1P31150 447 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 PXNP49023 591 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 ADCY7P51828 1080 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 PTH1RQ03431 593 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 AP3B2Q13367 1082 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 PSMD5Q16401 504 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 TXNDC11Q6PKC3 985 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 TMTC3Q6ZXV5 915 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 CACNA2D4Q7Z3S7 1137 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 PROSER1Q86XN7 944 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 NCOA7Q8NI08 942 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 IRF7Q92985 503 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 TCEAL4Q96EI5 215 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 ZSWIM3Q96MP5 696 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 DISC1Q9NRI5 854 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 VPS45Q9NRW7 570 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 MSRB2Q9Y3D2 182 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 SAMM50Q9Y512 469 aa8.6□□□□□ -1.03
SMARCE1-217ENST00000580654 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 LNP1A1A4G5 178 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 SMCO2A6NFE2 343 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 EXTL3O43909 919 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 MAFO75444 373 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 RPP40O75818 363 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 PSMC3P17980 439 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 CSRP1P21291 193 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 CCR2P41597 374 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 SOX9P48436 509 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 NAPAP54920 295 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 RAB33AQ14088 237 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 COL28A1Q2UY09 1125 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 UVSSAQ2YD98 709 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 JAKMIP3Q5VZ66 844 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 PKN3Q6P5Z2 889 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 TREML4Q6UXN2 200 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 RALYLQ86SE5 291 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 PACS2Q86VP3 889 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 CNNM3Q8NE01 707 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 HASPINQ8TF76 798 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 ZC3H10Q96K80 434 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 ASB16Q96NS5 453 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 LNPKQ9C0E8 428 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 ZFP14Q9HCL3 533 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 UBN1Q9NPG3 1134 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 CACNA2D2Q9NY47 1150 aa8.59□□□□□ -1.03
SMARCE1-217ENST00000580654 WDR27A2RRH5 827 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 SH2B2O14492 632 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 CDX4O14627 284 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 MOSPD3O75425 235 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 TADA2AO75478 443 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 KIF4AO95239 1232 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 IGFBP6P24592 240 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 GGCXP38435 758 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 VIPR2P41587 438 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 DNM2P50570 870 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 MLLT6P55198 1093 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 SETQ01105 290 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 FUT2Q10981 343 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 LRRC32Q14392 662 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 HSP90AA2PQ14568 343 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 PLK5Q496M5 336 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 FAM171A1Q5VUB5 890 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 TEX2Q8IWB9 1127 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 DEFB124Q8NES8 71 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 GJA10Q969M2 543 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 RSPRY1Q96DX4 576 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 TTPALQ9BTX7 342 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 APOL6Q9BWW8 343 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 DUSP15Q9H1R2 295 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 UNC45AQ9H3U1 944 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 NXF3Q9H4D5 531 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 ARID2Q68CP9 1835 aa8.58□□□□□ -1.04
SMARCE1-217ENST00000580654 SF3B1O75533 1304 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 ASCC3Q8N3C0 2202 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 PLXNB3Q9ULL4 1909 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 FAM221BA6H8Z2 402 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 SLC38A8A6NNN8 435 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 HIP1O00291 1037 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 MSH4O15457 936 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 CHMP2AO43633 222 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 TSPAN1O60635 241 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 NR1I2O75469 434 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 DGAT1O75907 488 aa8.57□□□□□ -1.04
SMARCE1-217ENST00000580654 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms