RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 BARX2Q9UMQ3 279 aaPredicted RBP10.79□□□□□ -0.68
GGA3-209ENST00000580646 HES2Q9Y543 173 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 PCDHA5Q9Y5H7 936 aa10.79□□□□□ -0.68
GGA3-209ENST00000580646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 A0A0B4J269 797 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 C2orf71A6NGG8 1288 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 RRP9O43818 475 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 B4GALT3O60512 393 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 PRPF6O94906 941 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 CXCL14O95715 111 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 POMCP01189 267 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 PPP1R2P41236 205 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 ZP2Q05996 745 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 KCNA1Q09470 495 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 KCNC3Q14003 757 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 HSP90AA2PQ14568 343 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 KNOP1Q1ED39 458 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 ZNF658Q5TYW1 1059 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 SLC39A4Q6P5W5 647 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 TMEM184AQ6ZMB5 413 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 DDX53Q86TM3 631 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 CDR2LQ86X02 465 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 ADHFE1Q8IWW8 467 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 C12orf56Q8IXR9 622 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 VPS52Q8N1B4 723 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 GUF1Q8N442 669 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 TRIML1Q8N9V2 468 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 SMRP1Q8NCR6 262 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 GOLGA5Q8TBA6 731 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 BCL7CQ8WUZ0 217 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 KHSRPQ92945 711 aaKnown RBP eCLIP10.78□□□□□ -0.68
GGA3-209ENST00000580646 HPS3Q969F9 1004 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 FAM193BQ96PV7 902 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 TSPAN18Q96SJ8 248 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 GAD1Q99259 594 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 TMEM175Q9BSA9 504 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 TCHPQ9BT92 498 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 APOL6Q9BWW8 343 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 CLSTN2Q9H4D0 955 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 NXF3Q9H4D5 531 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 EPHX3Q9H6B9 360 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 FAN1Q9Y2M0 1017 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.78□□□□□ -0.68
GGA3-209ENST00000580646 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
GGA3-209ENST00000580646 PLXNA4Q9HCM2 1894 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 PDXKO00764 312 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 OGTO15294 1046 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 FAM189A1O60320 539 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 LDHAP00338 332 aaKnown RBP10.77□□□□□ -0.69
GGA3-209ENST00000580646 CTSAP10619 480 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 HOXD13P35453 343 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 MYBPC2Q14324 1141 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 NFIL3Q16649 462 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 XKR4Q5GH76 650 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 SYCP3Q8IZU3 236 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 GLIS3Q8NEA6 775 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 GPT2Q8TD30 523 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 ZBTB45Q96K62 511 aaPredicted RBP10.77□□□□□ -0.69
GGA3-209ENST00000580646 SNX27Q96L92 541 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 MSTO1Q9BUK6 570 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 CCDC94Q9BW85 323 aaPredicted RBP10.77□□□□□ -0.69
GGA3-209ENST00000580646 C1QTNF1Q9BXJ1 281 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 NUP62CLQ9H1M0 184 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 TOPORSQ9NS56 1045 aaPredicted RBP10.77□□□□□ -0.69
GGA3-209ENST00000580646 MIOSQ9NXC5 875 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 ANKFY1Q9P2R3 1169 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 USP20Q9Y2K6 914 aa10.77□□□□□ -0.69
GGA3-209ENST00000580646 ATG2AQ2TAZ0 1938 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 ANKRD63C9JTQ0 380 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 PI4K2BG5E9Z4 385 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 NRP1O14786 923 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 TGFB1I1O43294 461 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 CLASP2O75122 1294 aaKnown RBP10.76□□□□□ -0.69
GGA3-209ENST00000580646 RECQL4O94761 1208 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 ADRB2P07550 413 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 CLTAP09496 248 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 AKAP5P24588 427 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 ADSSP30520 456 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 CA8P35219 290 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 MLH1P40692 756 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 SCNN1GP51170 649 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 YARSP54577 528 aaKnown RBP10.76□□□□□ -0.69
GGA3-209ENST00000580646 MORC3Q14149 939 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 ANKRD54Q6NXT1 300 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 FOXR2Q6PJQ5 311 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 ALKAL1Q6UXT8 129 aa10.76□□□□□ -0.69
GGA3-209ENST00000580646 RBM43Q6ZSC3 357 aaKnown RBP10.76□□□□□ -0.69
GGA3-209ENST00000580646 ALYREFQ86V81 257 aaKnown RBP10.76□□□□□ -0.69
GGA3-209ENST00000580646 SLC9A9Q8IVB4 645 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms