RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 CLCNKBP51801 687 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 GTF2BQ00403 316 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 DSG1Q02413 1049 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 ZP2Q05996 745 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 ALCAMQ13740 583 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 CBX2Q14781 532 aaPredicted RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 RARS2Q5T160 578 aaKnown RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 SLFN12LQ6IEE8 588 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 TMEM184AQ6ZMB5 413 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 TAS1R1Q7RTX1 841 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 RNF168Q8IYW5 571 aaPredicted RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 CEP57L1Q8IYX8 460 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 KCNN1Q92952 543 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 DNAJC19Q96DA6 116 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 DDX27Q96GQ7 796 aaKnown RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 KLHL5Q96PQ7 755 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 ACCSQ96QU6 501 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 ST6GALNAC4Q9H4F1 302 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 RPF1Q9H9Y2 349 aaKnown RBP11.88□□□□□ -0.51
NDEL1-208ENST00000580237 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 CNTN3Q9P232 1028 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 DPP7Q9UHL4 492 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 A0A0C4DFX4 3053 aa11.88□□□□□ -0.51
NDEL1-208ENST00000580237 TMEM189-UBE2V1I3L0A0 370 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 TEX28O15482 410 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 KCNE1P15382 129 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 MCM4P33991 863 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 TNFSF9P41273 254 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 ITIH3Q06033 890 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 KCNC3Q14003 757 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 NAB2Q15742 525 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 E2F4Q16254 413 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 PSMD5Q16401 504 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 AXDND1Q5T1B0 1012 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-208ENST00000580237 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 ADALQ6DHV7 355 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 SYCE2Q6PIF2 218 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 DCLRE1AQ6PJP8 1040 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 PRSS55Q6UWB4 352 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-208ENST00000580237 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-208ENST00000580237 NOC3LQ8WTT2 800 aaKnown RBP11.87□□□□□ -0.51
NDEL1-208ENST00000580237 FBXL18Q96ME1 805 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 RIPOR3Q96MK2 946 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 FIZ1Q96SL8 496 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 TRIM9Q9C026 710 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 MAN1C1Q9NR34 630 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
NDEL1-208ENST00000580237 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.87□□□□□ -0.51
NDEL1-208ENST00000580237 A0A0B4J269 797 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 TISP43B9A030 160 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 MYBP10242 640 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 RPL17P18621 184 aaKnown RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 CLCN4P51793 760 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SOX4Q06945 474 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SPAG1Q07617 926 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 POSTNQ15063 836 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 UPP1Q16831 310 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SLC10A6Q3KNW5 377 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 XKR4Q5GH76 650 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 RTP2Q5QGT7 225 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 ZBTB41Q5SVQ8 909 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 L1TD1Q5T7N2 865 aaKnown RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 KIAA0319Q5VV43 1072 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SLC39A4Q6P5W5 647 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 TMC5Q6UXY8 1006 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 ZNF720Q7Z2F6 126 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 PALB2Q86YC2 1186 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SLC22A17Q8WUG5 538 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 C18orf25Q96B23 403 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 RPGRIP1Q96KN7 1286 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 NECTIN4Q96NY8 510 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 HAPLN2Q9GZV7 340 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 PLEKHA5Q9HAU0 1116 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 KBTBD4Q9NVX7 518 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 TUBGCP4Q9UGJ1 667 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 RCOR1Q9UKL0 485 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 AGO2Q9UKV8 859 aaKnown RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 KCNH3Q9ULD8 1083 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
NDEL1-208ENST00000580237 TSC2P49815 1807 aa11.86□□□□□ -0.51
NDEL1-208ENST00000580237 FRMD3A2A2Y4 597 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 ANKRD63C9JTQ0 380 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 I3L4J1 428 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 PPP1R37O75864 691 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 WEE2P0C1S8 567 aa11.85□□□□□ -0.51
NDEL1-208ENST00000580237 TKTP29401 623 aaKnown RBP11.85□□□□□ -0.51
NDEL1-208ENST00000580237 RPL9P32969 192 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms