RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CCDC113Q9H0I3 377 aa14.69□□□□□ -0.06
TRAF4-214ENST00000580073 SLC38A7Q9NVC3 462 aa14.69□□□□□ -0.06
TRAF4-214ENST00000580073 STARD6P59095 220 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 RAB33AQ14088 237 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 PABPC1LQ4VXU2 614 aaKnown RBP14.68□□□□□ -0.06
TRAF4-214ENST00000580073 SPECC1Q5M775 1068 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 ATF7IP2Q5U623 682 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 C1orf210Q8IVY1 113 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 C4orf32Q8N8J7 132 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 RABGGTAQ92696 567 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
TRAF4-214ENST00000580073 PAAF1Q9BRP4 392 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 OSBPL6Q9BZF3 934 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 TMEM60Q9H2L4 133 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 MTRRQ9UBK8 725 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 GDAQ9Y2T3 454 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 KIF3AQ9Y496 699 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-214ENST00000580073 VPS13AQ96RL7 3174 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 TICRRQ7Z2Z1 1910 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 SPTBN4Q9H254 2564 aa14.68□□□□□ -0.06
TRAF4-214ENST00000580073 KANSL1LA0AUZ9 987 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 H3BQV1 296 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 SPTLC1O15269 473 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 NCAM2O15394 837 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 CCL16O15467 120 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 B3GAT3O94766 335 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 FGFR3P22607 806 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 CCT6AP40227 531 aaKnown RBP14.67□□□□□ -0.06
TRAF4-214ENST00000580073 RESTQ13127 1097 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 DMP1Q13316 513 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-214ENST00000580073 ZNF174Q15697 407 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 MLF2Q15773 248 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-214ENST00000580073 TTC38Q5R3I4 469 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 FAM173BQ6P4H8 233 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 FGF13Q92913 245 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 DRC1Q96MC2 740 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 PCDHB6Q9Y5E3 794 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 BACE2Q9Y5Z0 518 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 CACNA1IQ9P0X4 2223 aa14.67□□□□□ -0.06
TRAF4-214ENST00000580073 NUP210Q8TEM1 1887 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-214ENST00000580073 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 K7ERI5 159 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 KINO60870 393 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 LRG1P02750 347 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 DCNP07585 359 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 ELF1P32519 619 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 OR1D2P34982 312 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 NAB2Q15742 525 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 ZNF528Q3MIS6 628 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 ZNF568Q3ZCX4 644 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 ELMOD1Q8N336 334 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 BSNDQ8WZ55 320 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 FGF14Q92915 247 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 SECISBP2LQ93073 1101 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 TIPINQ9BVW5 301 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 MRPL4Q9BYD3 311 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 BHMT2Q9H2M3 363 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 C17orf75Q9HAS0 396 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 GDE1Q9NZC3 331 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 LRWD1Q9UFC0 647 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 KCNG1Q9UIX4 513 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 FBXO4Q9UKT5 387 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 TNFSF13BQ9Y275 285 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 MRPS17Q9Y2R5 130 aaKnown RBP14.66□□□□□ -0.06
TRAF4-214ENST00000580073 ZDHHC9Q9Y397 364 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 CDY1Q9Y6F8 540 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 TCHHQ07283 1943 aa14.66□□□□□ -0.06
TRAF4-214ENST00000580073 GVINP1Q7Z2Y8 2422 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 H7C4K7 107 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 LAD1O00515 517 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 SYN3O14994 580 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 LAMTOR5O43504 91 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 STX6O43752 255 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 SP9P0CG40 484 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 GRM5P41594 1212 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 UPP1Q16831 310 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 PARM1Q6UWI2 310 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 RUBCNQ92622 972 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 NELL2Q99435 816 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 AVENQ9NQS1 362 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-214ENST00000580073 DLGAP2Q9P1A6 1054 aa14.65□□□□□ -0.06
TRAF4-214ENST00000580073 MRPS23Q9Y3D9 190 aaKnown RBP14.65□□□□□ -0.06
TRAF4-214ENST00000580073 COL4A2P08572 1712 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 A0A087WWV3 80 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 PRRG1O14668 218 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 ZNF197O14709 1029 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 ECI2O75521 394 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 PDCP20941 246 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 CLCNKBP51801 687 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 GPC5P78333 572 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 PDIA5Q14554 519 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 UBXN2BQ14CS0 331 aa14.64□□□□□ -0.07
TRAF4-214ENST00000580073 GLRA4Q5JXX5 417 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms