RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 IGF2RP11717 2491 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RALGAPA1Q6GYQ0 2036 aa13.51□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SDK1Q7Z5N4 2213 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 B4GALT5O43286 388 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TRAPPC3O43617 180 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SLITRK3O94933 977 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PTPN2P17706 415 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CNR2P34972 360 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RBM25P49756 843 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SPIRE1Q08AE8 756 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 FZD5Q13467 585 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PPM1JQ5JR12 505 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ASAP3Q8TDY4 903 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HAS1Q92839 578 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ADPGKQ9BRR6 497 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PARD6AQ9NPB6 346 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TRPV5Q9NQA5 729 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HCFC1R1Q9NWW0 138 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MTRRQ9UBK8 725 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 BACE2Q9Y5Z0 518 aa13.5□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZNF197O14709 1029 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 N4BP3O15049 544 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZBTB39O15060 712 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MICAL2O94851 1124 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LRG1P02750 347 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RHOP08100 348 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 XRCC6P12956 609 aaKnown RBP eCLIP13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TDGF1P13385 188 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 FGFR3P22607 806 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 GLRA2P23416 452 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ELF1P32519 619 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 FAM187BQ17R55 369 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 C1orf228Q6PIY5 440 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ANKS3Q6ZW76 656 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CDR2LQ86X02 465 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZBTB8OSQ8IWT0 167 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZNF274Q96GC6 653 aaPredicted RBP13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 C2orf40Q9H1Z8 148 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZFP14Q9HCL3 533 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CDY1Q9Y6F8 540 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
CDK5RAP3-216ENST00000579853 COL4A3Q01955 1670 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PTGESO14684 152 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ADAM12O43184 909 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CXCL12P48061 93 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RARRES1P49788 294 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CSRP2Q16527 193 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TMEM132AQ24JP5 1023 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 TANGO2Q6ICL3 276 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MCPH1Q8NEM0 835 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 UROC1Q96N76 676 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 HSD17B14Q9BPX1 270 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 FZD8Q9H461 694 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SEMA4GQ9NTN9 838 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SNTG2Q9NY99 539 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NDRG2Q9UN36 371 aaKnown RBP13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CDKL5O76039 1030 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RECQL4O94761 1208 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 B3GAT3O94766 335 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 NAB2Q15742 525 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CDCA2Q69YH5 1023 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PRR23BQ6ZRT6 265 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 ZNF461Q8TAF7 563 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DEPDC1BQ8WUY9 529 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 FAM3CQ92520 227 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 YTHDC1Q96MU7 727 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PLA2G2FQ9BZM2 168 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 POLR3FQ9H1D9 316 aaPredicted RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SHISA7A6NL88 538 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PRRG1O14668 218 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 CEBPBP17676 345 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PSMC3P17980 439 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DMWDQ09019 674 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 LPAL2Q16609 132 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 MAPK6Q16659 721 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 DCAF4L1Q3SXM0 396 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 SLC8B1Q6J4K2 584 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.25
CDK5RAP3-216ENST00000579853 RUFY3Q7L099 469 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms