RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 SP4Q02446 784 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 CBLBQ13191 982 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 HNRNPDQ14103 355 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 LRRC32Q14392 662 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 UBXN2BQ14CS0 331 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SWI5Q1ZZU3 235 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SLC44A4Q53GD3 710 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 STPG1Q5TH74 334 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 PCNX4Q63HM2 1172 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 DIS3L2Q8IYB7 885 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 REXO1Q8N1G1 1221 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 DNAJB3Q8WWF6 145 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SEPT1Q8WYJ6 367 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 CASD1Q96PB1 797 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 MXRA8Q9BRK3 442 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 TGIF2Q9GZN2 237 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 TSPY26PQ9H489 355 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SH3GLB2Q9NR46 395 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 VPS45Q9NRW7 570 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 MSRB2Q9Y3D2 182 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SH3BP1Q9Y3L3 701 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 FAM181BA6NEQ2 426 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SFI1A8K8P3 1242 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 hCG_1984214I3L0E3 225 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SLC37A4O43826 429 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 EPCAMP16422 314 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 GNA11P29992 359 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 DPP6P42658 865 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 CRYBB1P53674 252 aaPredicted RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 SETQ01105 290 aaPredicted RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 ADCY1Q08828 1119 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 ZNF252P-AS1Q0IIN9 211 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 ITGB3BPQ13352 177 aaPredicted RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 DSC3Q14574 896 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 FAM173BQ6P4H8 233 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 TMC5Q6UXY8 1006 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 CYFIP1Q7L576 1253 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 C11orf74Q86VG3 221 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 WDR5BQ86VZ2 330 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 VPS52Q8N1B4 723 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 ZNF713Q8N859 430 aaPredicted RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 DAGLBQ8NCG7 672 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 CCDC148Q8NFR7 591 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 FBXO18Q8NFZ0 1043 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 LENG9Q96B70 501 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 GPRASP2Q96D09 838 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 C8orf76Q96K31 380 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 UBL7Q96S82 380 aaPredicted RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 DUSP9Q99956 384 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 ADAM2Q99965 735 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 LLPHQ9BRT6 129 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 TMEM175Q9BSA9 504 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 HERC2P3Q9BVR0 1158 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 OSBPL7Q9BZF2 842 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 FOXQ1Q9C009 403 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 TMX1Q9H3N1 280 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 TRPV5Q9NQA5 729 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 JADE2Q9NQC1 790 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.77□□□□□ -1.81
CDH19-204ENST00000579658 KCNH7Q9NS40 1196 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 KLF15Q9UIH9 416 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 WASF3Q9UPY6 502 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 SMC3Q9UQE7 1217 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 FAN1Q9Y2M0 1017 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 R3HCC1Q9Y3T6 440 aaKnown RBP3.77□□□□□ -1.81
CDH19-204ENST00000579658 PCDHGB7Q9Y5F8 929 aa3.77□□□□□ -1.81
CDH19-204ENST00000579658 WDR81Q562E7 1941 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 MEIS1O00470 390 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 INPPL1O15357 1258 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 DHX15O43143 795 aaKnown RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 GADD45BO75293 160 aaPredicted RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 ECI2O75521 394 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 HNRNPA1P09651 372 aaKnown RBP eCLIP3.76□□□□□ -1.81
CDH19-204ENST00000579658 ZSCAN22P10073 491 aaPredicted RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 KCNA2P16389 499 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 ZSCAN20P17040 1043 aaPredicted RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 KLRC2P26717 231 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 HOXA9P31269 272 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 CA8P35219 290 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 KRT2P35908 639 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 TOB1P50616 345 aaPredicted RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 UBE2HP62256 183 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 IGBP1P78318 339 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 CDC42EP1Q00587 391 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 AP3B2Q13367 1082 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 ZNF394Q53GI3 561 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 PRR16Q569H4 304 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 ZFYVE27Q5T4F4 411 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 UTP14CQ5TAP6 766 aaKnown RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 PDXDC2PQ6P474 469 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 PDXDC1Q6P996 788 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 SASS6Q6UVJ0 657 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 RINLQ6ZS11 566 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 PLPPR4Q7Z2D5 763 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 TRMT1LQ7Z2T5 733 aaKnown RBP3.76□□□□□ -1.81
CDH19-204ENST00000579658 FERMT3Q86UX7 667 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 PLA2G4DQ86XP0 818 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 TRIM50Q86XT4 487 aa3.76□□□□□ -1.81
CDH19-204ENST00000579658 C12orf76Q8N812 135 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms