RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 YAF2Q8IY57 180 aa14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 GAB3Q8WWW8 586 aa14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 SMARCD2Q92925 531 aa14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 DHX33Q9H6R0 707 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 TRPV5Q9NQA5 729 aa14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 VPS45Q9NRW7 570 aa14.65□□□□□ -0.06
CDK5RAP3-213ENST00000579605 ESYT2A0FGR8 921 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PRRG1O14668 218 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZNF197O14709 1029 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ASAP2O43150 1006 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 B4GALT5O43286 388 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 GJA1P17302 382 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ARF4P18085 180 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 IGFBP6P24592 240 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ARPP19P56211 112 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 IRX6P78412 446 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 C19orf48Q6RUI8 117 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 HS6ST3Q8IZP7 471 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 FAM200AQ8TCP9 573 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CCDC12Q8WUD4 166 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TCP11Q8WWU5 503 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 AVENQ9NQS1 362 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 IGF2RP11717 2491 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SDK1Q7Z5N4 2213 aa14.64□□□□□ -0.07
CDK5RAP3-213ENST00000579605 HEPACAM2A8MVW5 462 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 EML1O00423 815 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TDP2O95551 362 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 QARSP47897 775 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 USP11P51784 963 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PTENP60484 403 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ELAVL2Q12926 359 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 EMC2Q15006 297 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PON2Q15165 354 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DGKKQ5KSL6 1271 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CYP4A22Q5TCH4 519 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DAB2IPQ5VWQ8 1189 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CREB3L3Q68CJ9 461 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TXNDC11Q6PKC3 985 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 B3GNT9Q6UX72 402 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MFSD6LQ8IWD5 586 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 EXOC8Q8IYI6 725 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 BICD2Q8TD16 824 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DEPDC1BQ8WUY9 529 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CXCL16Q9H2A7 254 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MTRRQ9UBK8 725 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 F5P12259 2224 aa14.63□□□□□ -0.07
CDK5RAP3-213ENST00000579605 KLF18A0A0U1RQI7 1052 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 I3L4J1 428 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 THP07101 528 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MYL4P12829 197 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 HOXA6P31267 233 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 RFC5P40937 340 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CREB5Q02930 508 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MBTD1Q05BQ5 628 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SPIRE1Q08AE8 756 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 AMHR2Q16671 573 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SOWAHCQ53LP3 525 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 XKR9Q5GH70 373 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SLC27A1Q6PCB7 646 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 RTL10Q7L3V2 364 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZSCAN18Q8TBC5 510 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TBCKQ8TEA7 893 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SLITRK6Q9H5Y7 841 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 C8orf33Q9H7E9 229 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CYP4F11Q9HBI6 524 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 WRAP73Q9P2S5 460 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PCDHGA5Q9Y5G8 931 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 NCANO14594 1321 aa14.62□□□□□ -0.07
CDK5RAP3-213ENST00000579605 NOTCH4Q99466 2003 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SPECC1L-ADORA2AF8WAN1 911 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PTGESO14684 152 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZBTB39O15060 712 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 HYAL3O43820 417 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 FGFR3P22607 806 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TKTP29401 623 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TFDP1Q14186 410 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 Q4G0T1 1027 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MTRQ99707 1265 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SNTG2Q9NY99 539 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SETXQ7Z333 2677 aaKnown RBP14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 WDFY3Q8IZQ1 3526 aa14.61□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ARHGEF37A1IGU5 675 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ARNTLO00327 626 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DKC1O60832 514 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 MOSPD3O75425 235 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 B3GAT3O94766 335 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 SEC24AO95486 1093 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 CAVIN2O95810 425 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ROR1Q01973 937 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PCBP1Q15365 356 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 TEAD2Q15562 447 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 UAP1L1Q3KQV9 507 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PLK5Q496M5 336 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 IQCEQ6IPM2 695 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 PKN3Q6P5Z2 889 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 DEFB124Q8NES8 71 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 RSPRY1Q96DX4 576 aa14.6□□□□□ -0.07
CDK5RAP3-213ENST00000579605 ZNF512Q96ME7 567 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms