RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 RHOBTB3O94955 611 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 TRIM49P0CI25 452 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 TRIM49CP0CI26 452 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 PWP2Q15269 919 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 NXNQ6DKJ4 435 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 KAZALD1Q96I82 304 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 AGO4Q9HCK5 861 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 KCNQ5Q9NR82 932 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CDC23Q9UJX2 597 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 NFIBO00712 420 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 NPEPPSP55786 919 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 FRA10AC1Q70Z53 315 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 MCUQ8NE86 351 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 SMYD2Q9NRG4 433 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 MFAP3LO75121 409 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 TMCC1O94876 653 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 ARL4CP56559 192 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 MKL1Q969V6 931 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 SPDYE5A6NIY4 337 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 ETFBP38117 255 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CLCN3P51790 818 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CBX1P83916 185 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 SNX1Q13596 522 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 ARHGEF7Q14155 803 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 KIZQ2M2Z5 673 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 PAN2Q504Q3 1202 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 CES5AQ6NT32 575 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 RNF10Q8N5U6 811 aaKnown RBP10.81□□□□□ -0.68
MSI2-209ENST00000579483 SLC4A9Q96Q91 983 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CENPKQ9BS16 269 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 STK33Q9BYT3 514 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 APEX2Q9UBZ4 518 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 NAGPAQ9UK23 515 aa10.81□□□□□ -0.68
MSI2-209ENST00000579483 CCDC151A5D8V7 595 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 INSRRP14616 1297 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 AVPR1AP37288 418 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 TRAPPC11Q7Z392 1133 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 PHLDB2Q86SQ0 1253 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 NT5DC4Q86YG4 428 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ANKS1AQ92625 1134 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 WNT8AQ9H1J5 351 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSI2-209ENST00000579483 PCDHB2Q9Y5E7 798 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 HEY1Q9Y5J3 304 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 PHLPP1O60346 1717 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 IFT172Q9UG01 1749 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ZNF197O14709 1029 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 PDGFRBP09619 1106 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ATICP31939 592 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 GTF2H1P32780 548 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ARL4DP49703 201 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 NOP14P78316 857 aaKnown RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 C10orf120Q5SQS8 335 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 CAPN12Q6ZSI9 719 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 CATSPER3Q86XQ3 398 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ZNF557Q8N988 423 aaPredicted RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 RBBP8NLQ8NC74 664 aaPredicted RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 RMDN1Q96DB5 314 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 MUC3BQ9H195 1237 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 C2CD2LO14523 706 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 MTSS1O43312 755 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 TOMM70O94826 608 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 HLA-DRAP01903 254 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 MCF2P10911 925 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 PRAMEP78395 509 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 MEI1Q5TIA1 1274 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 MSL3Q8N5Y2 521 aaKnown RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 PYROXD1Q8WU10 500 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 DEPDC1BQ8WUY9 529 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 NUP85Q9BW27 656 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 DRC3Q9H069 523 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 IQANK1A0A1B0GTG1 560 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 RTN2O75298 545 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 FTLP02792 175 aaPredicted RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 RALBP11234 206 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 FMO5P49326 533 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 EIF2B5Q13144 721 aaKnown RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 BBS9Q3SYG4 887 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 TRPM4Q8TD43 1214 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 HAUS8Q9BT25 410 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 SETD4Q9NVD3 440 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 UVRAGQ9P2Y5 699 aa10.8□□□□□ -0.68
MSI2-209ENST00000579483 UXTQ9UBK9 157 aaPredicted RBP10.8□□□□□ -0.68
MSI2-209ENST00000579483 TRIM49BA6NDI0 452 aa10.79□□□□□ -0.68
MSI2-209ENST00000579483 TMEM247A6NEH6 219 aa10.79□□□□□ -0.68
MSI2-209ENST00000579483 CFAP99D6REC4 459 aa10.79□□□□□ -0.68
MSI2-209ENST00000579483 E5RI56 91 aa10.79□□□□□ -0.68
MSI2-209ENST00000579483 KRT37O76014 449 aa10.79□□□□□ -0.68
MSI2-209ENST00000579483 F9P00740 461 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms