RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 HEBP1Q9NRV9 189 aa10.61□□□□□ -0.71
MSI2-208ENST00000579466 NDRG2Q9UN36 371 aaKnown RBP10.61□□□□□ -0.71
MSI2-208ENST00000579466 CITO14578 2027 aa10.61□□□□□ -0.71
MSI2-208ENST00000579466 TPRP12270 2363 aaKnown RBP10.6□□□□□ -0.71
MSI2-208ENST00000579466 ARHGEF35A5YM69 484 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 C1RP00736 705 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 RHOP08100 348 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 HOXA9P31269 272 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 OSTNP61366 133 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 PFKPQ01813 784 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 PRKCQQ04759 706 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 RAB33AQ14088 237 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 TRIM29Q14134 588 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 LPAL2Q16609 132 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
MSI2-208ENST00000579466 ZBTB41Q5SVQ8 909 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 CEP120Q8N960 986 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 C3orf58Q8NDZ4 430 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 ATRIPQ8WXE1 791 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 DDX27Q96GQ7 796 aaKnown RBP10.6□□□□□ -0.71
MSI2-208ENST00000579466 MTMR9Q96QG7 549 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 DDX23Q9BUQ8 820 aaKnown RBP10.6□□□□□ -0.71
MSI2-208ENST00000579466 C2orf40Q9H1Z8 148 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 USP18Q9UMW8 372 aa10.6□□□□□ -0.71
MSI2-208ENST00000579466 SMG5Q9UPR3 1016 aaKnown RBP10.6□□□□□ -0.71
MSI2-208ENST00000579466 PDCD11Q14690 1871 aaKnown RBP10.59□□□□□ -0.71
MSI2-208ENST00000579466 EPG5Q9HCE0 2579 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 PRRG1O14668 218 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 SPTLC1O15269 473 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 LRG1P02750 347 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
MSI2-208ENST00000579466 FGFR3P22607 806 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 ROR1Q01973 937 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 ME3Q16798 604 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 FAM187BQ17R55 369 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 DCAF4L1Q3SXM0 396 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 ATF7IP2Q5U623 682 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 TANGO2Q6ICL3 276 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 POTEHQ6S545 545 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 CORO1BQ9BR76 489 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 CCDC113Q9H0I3 377 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 TUFT1Q9NNX1 390 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 FBXO4Q9UKT5 387 aa10.59□□□□□ -0.71
MSI2-208ENST00000579466 F5P12259 2224 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 ACKR2O00590 384 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 EPB41L2O43491 1005 aaKnown RBP10.58□□□□□ -0.72
MSI2-208ENST00000579466 ELF1P32519 619 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 NAMPTP43490 491 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 SOX4Q06945 474 aaPredicted RBP10.58□□□□□ -0.72
MSI2-208ENST00000579466 MTAPQ13126 283 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 ZNF528Q3MIS6 628 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 NSUN7Q8NE18 718 aaKnown RBP10.58□□□□□ -0.72
MSI2-208ENST00000579466 ERMNQ8TAM6 284 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 TCEAL4Q96EI5 215 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 IFT74Q96LB3 600 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 CNTNAP3BQ96NU0 1288 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 PPP1R10Q96QC0 940 aaKnown RBP10.58□□□□□ -0.72
MSI2-208ENST00000579466 NACC1Q96RE7 527 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 CNTNAP3Q9BZ76 1288 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 BRD9Q9H8M2 597 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 CYP4F11Q9HBI6 524 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 DLL3Q9NYJ7 618 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 KCNH3Q9ULD8 1083 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 COL4A2P08572 1712 aa10.58□□□□□ -0.72
MSI2-208ENST00000579466 RALGAPA1Q6GYQ0 2036 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ACACBO00763 2458 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 CCDC169A6NNP5 214 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 PODXLO00592 558 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
MSI2-208ENST00000579466 ECI2O75521 394 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 OR52Z1P0C646 297 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 XRCC6P12956 609 aaKnown RBP eCLIP10.57□□□□□ -0.72
MSI2-208ENST00000579466 GJA1P17302 382 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 CYP11B2P19099 503 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 KCNA4P22459 653 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 YARSP54577 528 aaKnown RBP10.57□□□□□ -0.72
MSI2-208ENST00000579466 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ZNF174Q15697 407 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 UPP1Q16831 310 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 UVSSAQ2YD98 709 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 NT5DC1Q5TFE4 455 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ZNF852Q6ZMS4 543 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 SECISBP2LQ93073 1101 aaKnown RBP10.57□□□□□ -0.72
MSI2-208ENST00000579466 BHMT2Q9H2M3 363 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 ZSCAN32Q9NX65 697 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
MSI2-208ENST00000579466 PCDHGA2Q9Y5H1 932 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 MYH11P35749 1972 aa10.57□□□□□ -0.72
MSI2-208ENST00000579466 SMIM28A0A1B0GU29 152 aa10.56□□□□□ -0.72
MSI2-208ENST00000579466 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
MSI2-208ENST00000579466 TMEM189-UBE2V1I3L0A0 370 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms