RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 NCDNQ9UBB6 729 aa9.43□□□□□ -0.9
CASC3-206ENST00000579238 GDAQ9Y2T3 454 aa9.43□□□□□ -0.9
CASC3-206ENST00000579238 MRPS23Q9Y3D9 190 aaKnown RBP9.43□□□□□ -0.9
CASC3-206ENST00000579238 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
CASC3-206ENST00000579238 GPR179Q6PRD1 2367 aa9.43□□□□□ -0.9
CASC3-206ENST00000579238 DNAH14Q0VDD8 3507 aa9.43□□□□□ -0.9
CASC3-206ENST00000579238 ZNF292O60281 2723 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 ARHGEF35A5YM69 484 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 TRAPPC3O43617 180 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 MED24O75448 989 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 RHOP08100 348 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 LIG1P18858 919 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 CD72P21854 359 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 SDHBP21912 280 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 IGFBP6P24592 240 aaPredicted RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 RPA1P27694 616 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 RPS9P46781 194 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 EFNA5P52803 228 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 TRIM29Q14134 588 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 PPP2R5AQ15172 486 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 UPP1Q16831 310 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 RSPO4Q2I0M5 234 aaPredicted RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 EEF1DP3Q658K8 133 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 PADI6Q6TGC4 694 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 CD300LGQ6UXG3 332 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 ZNF852Q6ZMS4 543 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 TPRG1Q6ZUI0 275 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 APBB1IPQ7Z5R6 666 aaPredicted RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 NECAB1Q8N987 351 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 ING5Q8WYH8 240 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 NELL1Q92832 810 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 SECISBP2LQ93073 1101 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 MCRS1Q96EZ8 462 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 PPP1R10Q96QC0 940 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 POLR3CQ9BUI4 534 aaPredicted RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 USP20Q9Y2K6 914 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 MRPS17Q9Y2R5 130 aaKnown RBP9.42□□□□□ -0.9
CASC3-206ENST00000579238 CDY1Q9Y6F8 540 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 NOTCH4Q99466 2003 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 VWA8A3KMH1 1905 aa9.42□□□□□ -0.9
CASC3-206ENST00000579238 CEP250Q9BV73 2442 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ARHGEF37A1IGU5 675 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 LILRB5O75023 590 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 LRG1P02750 347 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 EDN1P05305 212 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 PTPN2P17706 415 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 TKTP29401 623 aaKnown RBP9.41□□□□□ -0.9
CASC3-206ENST00000579238 ELF1P32519 619 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 MCM7P33993 719 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 CLCNKBP51801 687 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ANAPC15P60006 121 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 SLC5A9Q2M3M2 681 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 GLRA4Q5JXX5 417 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ATF7IP2Q5U623 682 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 NSUN7Q8NE18 718 aaKnown RBP9.41□□□□□ -0.9
CASC3-206ENST00000579238 ZNF461Q8TAF7 563 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ERMNQ8TAM6 284 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 DNASE1L2Q92874 299 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 ELSPBP1Q96BH3 223 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 IFT74Q96LB3 600 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 FAM126AQ9BYI3 521 aaPredicted RBP9.41□□□□□ -0.9
CASC3-206ENST00000579238 PLA2G2FQ9BZM2 168 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 PRMT8Q9NR22 394 aaPredicted RBP9.41□□□□□ -0.9
CASC3-206ENST00000579238 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
CASC3-206ENST00000579238 COL4A3Q01955 1670 aa9.41□□□□□ -0.9
CASC3-206ENST00000579238 PATJQ8NI35 1801 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 PRR5-ARHGAP8B1AHC4 643 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 I3L4J1 428 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 MAN2B1O00754 1011 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 PRRG1O14668 218 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ZNF197O14709 1029 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 TBC1D4O60343 1298 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 MICAL2O94851 1124 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ABLIM3O94929 683 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 CEBPBP17676 345 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 MUTP22033 750 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 BRCC3P46736 316 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ARHGAP8P85298 464 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ROR1Q01973 937 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ORC2Q13416 577 aaPredicted RBP9.4□□□□□ -0.9
CASC3-206ENST00000579238 FZD5Q13467 585 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ME3Q16798 604 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 XKR4Q5GH76 650 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 NT5DC1Q5TFE4 455 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 TANGO2Q6ICL3 276 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 POTEHQ6S545 545 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 C3orf58Q8NDZ4 430 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 KIFAP3Q92845 792 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 KIFC3Q9BVG8 833 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 GOLGA2P5Q9HBQ8 144 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 ZFP14Q9HCL3 533 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 HEBP1Q9NRV9 189 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 TNFSF13BQ9Y275 285 aa9.4□□□□□ -0.9
CASC3-206ENST00000579238 FRYLO94915 3013 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms