RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ANO10Q9NW15 660 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 HCSTQ9UBK5 93 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 DNAJB4Q9UDY4 337 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 RWDD2AQ9UIY3 292 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 PLAGL2Q9UPG8 496 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 TRIM49BA6NDI0 452 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 C5orf67F2Z3F1 127 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 MAPK13O15264 365 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 LINC00271P0C7V0 271 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 CYP3A5P20815 502 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 ERCC5P28715 1186 aaPredicted RBP16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 PSMC2P35998 433 aaKnown RBP16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 PMS1P54277 932 aaKnown RBP16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 STX17P56962 302 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 KRT17Q04695 432 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 SPAG1Q07617 926 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 CYP24A1Q07973 514 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 TMEM132DQ14C87 1099 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 PSMD6Q15008 389 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 NAB2Q15742 525 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 ZBTB6Q15916 424 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 FBXO22Q8NEZ5 403 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 ARNTL2Q8WYA1 636 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 DDX27Q96GQ7 796 aaKnown RBP16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 FNBP1Q96RU3 617 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 CERS4Q9HA82 394 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 SPG21Q9NZD8 308 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 MTUS1Q9ULD2 1270 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 C2CD2Q9Y426 696 aa16.88■□□□□ 0.29
SLC6A4-205ENST00000579221 NRP1O14786 923 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 PPM1AP35813 382 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 SLC11A1P49279 550 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 CASP4P49662 377 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 DPCR1Q3MIW9 517 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 TTI2Q6NXR4 508 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 FILIP1Q7Z7B0 1213 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 USP37Q86T82 979 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 C18orf25Q96B23 403 aaPredicted RBP16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 DUSP9Q99956 384 aaKnown RBP16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 C11orf84Q9BUA3 381 aaPredicted RBP16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
SLC6A4-205ENST00000579221 CASTOR2A6NHX0 329 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 AKAP3O75969 853 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 KRT13P13646 458 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 TFAMQ00059 246 aaKnown RBP16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 STX1AQ16623 288 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 DUOXA2Q1HG44 320 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 SPATA1Q5VX52 437 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 DCLRE1AQ6PJP8 1040 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 ZC3H3Q8IXZ2 948 aaKnown RBP16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 FAM186BQ8IYM0 893 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 SLC39A11Q8N1S5 342 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 CSGALNACT2Q8N6G5 542 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 KLHL23Q8NBE8 558 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 TMC2Q8TDI7 906 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 CCDC127Q96BQ5 260 aa16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 PUF60Q9UHX1 559 aaKnown RBP16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 FNDC1Q4ZHG4 1894 aaPredicted RBP16.86■□□□□ 0.29
SLC6A4-205ENST00000579221 H3BNC9 293 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 SLC16A3O15427 465 aaKnown RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 B4GALT3O60512 393 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TADA2AO75478 443 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 FGF18O76093 207 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 NFICP08651 508 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 DLATP10515 647 aaKnown RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TNNI1P19237 187 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 PBX3P40426 434 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 PLCB3Q01970 1234 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TYRO3Q06418 890 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 SOX4Q06945 474 aaPredicted RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 GPM6BQ13491 265 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TPD52L1Q16890 204 aaPredicted RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 SPRED2Q7Z698 418 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 WDR49Q8IV35 697 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 PARD3BQ8TEW8 1205 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TMEM169Q96HH4 297 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 IGSF21Q96ID5 467 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 CGRRF1Q99675 332 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 DPP3Q9NY33 737 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 PRG3Q9Y2Y8 225 aaPredicted RBP16.85■□□□□ 0.29
SLC6A4-205ENST00000579221 PODXLO00592 558 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 GNA14O95837 355 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 TNNC2P02585 160 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 TMEM191BP0C7N4 346 aa16.84■□□□□ 0.29
SLC6A4-205ENST00000579221 CCDC192P0DO97 292 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms